RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 COG8Q96MW5 612 aa16.4■□□□□ 0.22
LIG1-206ENST00000594067 PAIP1Q9H074 479 aaKnown RBP16.4■□□□□ 0.22
LIG1-206ENST00000594067 ACTR3BQ9P1U1 418 aa16.4■□□□□ 0.22
LIG1-206ENST00000594067 OAZ3Q9UMX2 235 aa16.4■□□□□ 0.22
LIG1-206ENST00000594067 PATJQ8NI35 1801 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 INPP4BO15327 924 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 NCK1P16333 377 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 HLA-DPA1P20036 260 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 PRDX3P30048 256 aaKnown RBP16.39■□□□□ 0.21
LIG1-206ENST00000594067 STC1P52823 247 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 BNIP2Q12982 314 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 LCP2Q13094 533 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 NFYCQ13952 458 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 TAF1CQ15572 869 aaPredicted RBP16.39■□□□□ 0.21
LIG1-206ENST00000594067 BLOC1S3Q6QNY0 202 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 ZBTB8BQ8NAP8 495 aaPredicted RBP16.39■□□□□ 0.21
LIG1-206ENST00000594067 BRSK1Q8TDC3 778 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.39■□□□□ 0.215e-11■■■■■ 94.1
LIG1-206ENST00000594067 THAP11Q96EK4 314 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 FEM1CQ96JP0 617 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 BTN2A3PQ96KV6 586 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 FBXO44Q9H4M3 255 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 SLC52A3Q9NQ40 469 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 PCDHA9Q9Y5H5 950 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 KANSL1LA0AUZ9 987 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 SLC12A8A0AV02 714 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 GIPC1O14908 333 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 ACOX3O15254 700 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 KERAO60938 352 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 ECI2O75521 394 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 BAIAP3O94812 1187 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 DCKP27707 260 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 CASP2P42575 452 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 CCT8P50990 548 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 CBX3Q13185 183 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 RAB39AQ14964 217 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 CYP51A1Q16850 503 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 GPR107Q5VW38 600 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 ZNF420Q8TAQ5 688 aaPredicted RBP16.39■□□□□ 0.21
LIG1-206ENST00000594067 CDKN2AIPNLQ96HQ2 116 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 MYRFLQ96LU7 910 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 GPR45Q9Y5Y3 372 aa16.39■□□□□ 0.21
LIG1-206ENST00000594067 A0A1W2PPW3 197 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 IQCA1LA6NCM1 817 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 CDC7O00311 574 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 CELF2O95319 508 aaKnown RBP16.38■□□□□ 0.21
LIG1-206ENST00000594067 IDO1P14902 403 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 CD247P20963 164 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 GSK3BP49841 420 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 AGTR2P50052 363 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 TNK2Q07912 1038 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 ATP6AP1Q15904 470 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 ZNF829Q3KNS6 432 aaPredicted RBP16.38■□□□□ 0.21
LIG1-206ENST00000594067 SETMARQ53H47 684 aaPredicted RBP16.38■□□□□ 0.21
LIG1-206ENST00000594067 FGD3Q5JSP0 725 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 PAGE3Q5JUK9 113 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 C10orf120Q5SQS8 335 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 ANKS6Q68DC2 871 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 DCP1BQ8IZD4 617 aaKnown RBP16.38■□□□□ 0.21
LIG1-206ENST00000594067 C2orf69Q8N8R5 385 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 ATAD1Q8NBU5 361 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 STAG3L4Q8TBR4 150 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 TBC1D15Q8TC07 691 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 CYGBQ8WWM9 190 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 KIAA1191Q96A73 305 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 ESAMQ96AP7 390 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 TMEM125Q96AQ2 219 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 FBXL20Q96IG2 436 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 POPDC3Q9HBV1 291 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 GALPQ9UBC7 116 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 PRG3Q9Y2Y8 225 aaPredicted RBP16.38■□□□□ 0.21
LIG1-206ENST00000594067 TDRD15B5MCY1 1934 aaKnown RBP16.38■□□□□ 0.21
LIG1-206ENST00000594067 TRPM7Q96QT4 1865 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 ASPDHA6ND91 283 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 ENPP3O14638 875 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 CBFA2T3O75081 653 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 INHBBP09529 407 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 HOXB8P17481 243 aaPredicted RBP16.38■□□□□ 0.21
LIG1-206ENST00000594067 OGNP20774 298 aaKnown RBP16.38■□□□□ 0.21
LIG1-206ENST00000594067 PARP15Q460N3 678 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 SLC44A4Q53GD3 710 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 SPRED1Q7Z699 444 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 CFAP52Q8N1V2 620 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 FBXO32Q969P5 355 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 CENPNQ96H22 339 aaPredicted RBP16.38■□□□□ 0.21
LIG1-206ENST00000594067 SMIM14Q96QK8 99 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 C9orf16Q9BUW7 83 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 NAA50Q9GZZ1 169 aaKnown RBP16.38■□□□□ 0.21
LIG1-206ENST00000594067 TBC1D23Q9NUY8 699 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 MARCH2Q9P0N8 246 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 USP22Q9UPT9 525 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 MED16Q9Y2X0 877 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 SPO11Q9Y5K1 396 aa16.38■□□□□ 0.21
LIG1-206ENST00000594067 NPEPPSL1A6NEC2 478 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 TRIM64BA6NI03 449 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 DRGXA6NNA5 263 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 KPNA6O60684 536 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 PRAMEF11O60813 436 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 COQ9O75208 318 aa16.37■□□□□ 0.21
LIG1-206ENST00000594067 TTKP33981 857 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms