RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 CSHL1Q14406 222 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 C8orf82Q6P1X6 216 aaPredicted RBP14.19□□□□□ -0.14
RANBP3-229ENST00000592771 GK5Q6ZS86 529 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 SPATA31D4Q6ZUB0 917 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 ARHGAP22Q7Z5H3 698 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 FIBCD1Q8N539 461 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 OR13C4Q8NGS5 318 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 TRPC4APQ8TEL6 797 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 MRPS31Q92665 395 aaKnown RBP14.19□□□□□ -0.14
RANBP3-229ENST00000592771 EXOC2Q96KP1 924 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 CNBD2Q96M20 576 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 TMEM181Q9P2C4 612 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 ATXN10Q9UBB4 475 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 VWA7Q9Y334 891 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 H0Y626 953 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 CD3EAPO15446 510 aaKnown RBP14.19□□□□□ -0.14
RANBP3-229ENST00000592771 NRP2O60462 931 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 GLP2RO95838 553 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 PIRTP0C851 137 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 CYP4F8P98187 520 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 PTPRCAPQ14761 206 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 TAF1AQ15573 450 aaPredicted RBP14.19□□□□□ -0.14
RANBP3-229ENST00000592771 TYSND1Q2T9J0 566 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 NADK2Q4G0N4 442 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 COL13A1Q5TAT6 717 aaPredicted RBP14.19□□□□□ -0.14
RANBP3-229ENST00000592771 MRNIPQ6NTE8 343 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 PRMT9Q6P2P2 845 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 NCEH1Q6PIU2 408 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 RBM44Q6ZP01 1051 aaKnown RBP14.19□□□□□ -0.14
RANBP3-229ENST00000592771 CCDC149Q6ZUS6 474 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 HTR3DQ70Z44 454 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 CHERPQ8IWX8 916 aaKnown RBP14.19□□□□□ -0.14
RANBP3-229ENST00000592771 CPXM2Q8N436 756 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 CARNMT1Q8N4J0 409 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 DCAF4L2Q8NA75 395 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 PCYOX1LQ8NBM8 494 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 CROTQ9UKG9 612 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 RAI2Q9Y5P3 530 aa14.19□□□□□ -0.14
RANBP3-229ENST00000592771 MTCL1Q9Y4B5 1905 aaKnown RBP14.18□□□□□ -0.14
RANBP3-229ENST00000592771 DYTNA2CJ06 578 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 TYW5A2RUC4 315 aaKnown RBP14.18□□□□□ -0.14
RANBP3-229ENST00000592771 TMEM233B4DJY2 109 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 E7ENX8 843 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 STX16-NPEPL1H3BU86 382 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 SRP72O76094 671 aaKnown RBP14.18□□□□□ -0.14
RANBP3-229ENST00000592771 ASLP04424 464 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 PFKLP17858 780 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 SUOXP51687 545 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 SEMA3AQ14563 771 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 AGKQ53H12 422 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 IL23RQ5VWK5 629 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 LDB1Q86U70 411 aaPredicted RBP14.18□□□□□ -0.14
RANBP3-229ENST00000592771 HS6ST3Q8IZP7 471 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 PACRGLQ8N7B6 248 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 PNPLA1Q8N8W4 532 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 KLHL23Q8NBE8 558 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 OR4L1Q8NH43 312 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 WFDC5Q8TCV5 224 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 ZUFSPQ96AP4 578 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 CDKN2AIPNLQ96HQ2 116 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 MARK4Q96L34 752 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 TIMMDC1Q9NPL8 285 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 ACSS2Q9NR19 701 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 PCDH10Q9P2E7 1040 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 VPS51Q9UID3 782 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 ZNF510Q9Y2H8 683 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 TRAF6Q9Y4K3 522 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 IRAK3Q9Y616 596 aa14.18□□□□□ -0.14
RANBP3-229ENST00000592771 HELZP42694 1942 aaKnown RBP14.18□□□□□ -0.14
RANBP3-229ENST00000592771 FBP2O00757 339 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 MRASO14807 208 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 LRG1P02750 347 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 ADH1AP07327 375 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 CCDC166P0CW27 439 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 HNRNPLP14866 589 aaKnown RBP eCLIP14.17□□□□□ -0.143e-8■■■■□ 26.6
RANBP3-229ENST00000592771 FDXRP22570 491 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 CDKN2DP55273 166 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 STX1BP61266 288 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 TUBA4AP68366 448 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 TRAF2Q12933 501 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 MPP7Q5T2T1 576 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 C6orf52Q5T4I8 152 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 ZNF549Q6P9A3 640 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 LINGO4Q6UY18 593 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 SPATA6LQ8N4H0 392 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 RNF148Q8N7C7 305 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 ANKFN1Q8N957 763 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 HMGCLL1Q8TB92 370 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 LPGAT1Q92604 370 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 ATP6V1E2Q96A05 226 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 MPP4Q96JB8 637 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 PRPF18Q99633 342 aaKnown RBP14.17□□□□□ -0.14
RANBP3-229ENST00000592771 HOPXQ9BPY8 73 aaPredicted RBP14.17□□□□□ -0.14
RANBP3-229ENST00000592771 TRIM15Q9C019 465 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 C8orf4Q9NR00 106 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 CATSPERZQ9NTU4 200 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 ARMC1Q9NVT9 282 aa14.17□□□□□ -0.14
RANBP3-229ENST00000592771 LSM7Q9UK45 103 aaKnown RBP14.17□□□□□ -0.14
RANBP3-229ENST00000592771 MTF2Q9Y483 593 aaPredicted RBP14.17□□□□□ -0.14
RANBP3-229ENST00000592771 NRG2O14511 850 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms