RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 ECEL1O95672 775 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 RPLP0P05388 317 aaKnown RBP26.96■■□□□ 1.91
SMAD4-213ENST00000591914 CCDC175P0C221 793 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 CCZ1BP86790 482 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 CCZ1P86791 482 aaPredicted RBP26.96■■□□□ 1.91
SMAD4-213ENST00000591914 PRPSAP1Q14558 356 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 GLT6D1Q7Z4J2 308 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 ZNF438Q7Z4V0 828 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 SPRED1Q7Z699 444 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 PHYKPLQ8IUZ5 450 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 KLHDC8BQ8IXV7 354 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 DTX3LQ8TDB6 740 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 VPS35Q96QK1 796 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 GFM1Q96RP9 751 aaKnown RBP26.96■■□□□ 1.91
SMAD4-213ENST00000591914 LRRN3Q9H3W5 708 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 SYNDIG1Q9H7V2 258 aa26.96■■□□□ 1.91
SMAD4-213ENST00000591914 GPR89AB7ZAQ6 455 aa26.95■■□□□ 1.9
SMAD4-213ENST00000591914 D6RAR5 112 aa26.95■■□□□ 1.9
SMAD4-213ENST00000591914 GPR89BP0CG08 455 aa26.95■■□□□ 1.9
SMAD4-213ENST00000591914 ZDHHC20Q5W0Z9 365 aa26.95■■□□□ 1.9
SMAD4-213ENST00000591914 CHST15Q7LFX5 561 aaPredicted RBP26.95■■□□□ 1.9
SMAD4-213ENST00000591914 ARL14Q8N4G2 192 aa26.95■■□□□ 1.9
SMAD4-213ENST00000591914 PATE1Q8WXA2 126 aa26.95■■□□□ 1.9
SMAD4-213ENST00000591914 ATXN7L3BQ96GX2 97 aa26.95■■□□□ 1.9
SMAD4-213ENST00000591914 OR2AG1Q9H205 316 aa26.95■■□□□ 1.9
SMAD4-213ENST00000591914 ARFGAP3Q9NP61 516 aa26.95■■□□□ 1.9
SMAD4-213ENST00000591914 IL26Q9NPH9 171 aa26.95■■□□□ 1.9
SMAD4-213ENST00000591914 TMPRSS11EQ9UL52 423 aa26.95■■□□□ 1.9
SMAD4-213ENST00000591914 BPTFQ12830 3046 aa26.95■■□□□ 1.9
SMAD4-213ENST00000591914 MPOP05164 745 aa26.94■■□□□ 1.9
SMAD4-213ENST00000591914 ZNF8P17098 575 aaPredicted RBP26.94■■□□□ 1.9
SMAD4-213ENST00000591914 LSSP48449 732 aa26.94■■□□□ 1.9
SMAD4-213ENST00000591914 NR1D2Q14995 579 aa26.94■■□□□ 1.9
SMAD4-213ENST00000591914 ZNF648Q5T619 568 aaPredicted RBP26.94■■□□□ 1.9
SMAD4-213ENST00000591914 MEI1Q5TIA1 1274 aa26.94■■□□□ 1.9
SMAD4-213ENST00000591914 ADGRG6Q86SQ4 1221 aa26.94■■□□□ 1.9
SMAD4-213ENST00000591914 Q8N9G6 341 aaPredicted RBP26.94■■□□□ 1.9
SMAD4-213ENST00000591914 FAM71DQ8N9W8 422 aa26.94■■□□□ 1.9
SMAD4-213ENST00000591914 POLR1BQ9H9Y6 1135 aa26.94■■□□□ 1.9
SMAD4-213ENST00000591914 LZTFL1Q9NQ48 299 aa26.94■■□□□ 1.9
SMAD4-213ENST00000591914 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP26.94■■□□□ 1.9
SMAD4-213ENST00000591914 A0A1W2PNU3 283 aaPredicted RBP26.93■■□□□ 1.9
SMAD4-213ENST00000591914 CHUKO15111 745 aa26.93■■□□□ 1.9
SMAD4-213ENST00000591914 GRID2O43424 1007 aa26.93■■□□□ 1.9
SMAD4-213ENST00000591914 PPFIA2O75334 1257 aa26.93■■□□□ 1.9
SMAD4-213ENST00000591914 DXOO77932 396 aaKnown RBP26.93■■□□□ 1.9
SMAD4-213ENST00000591914 GABREP78334 506 aa26.93■■□□□ 1.9
SMAD4-213ENST00000591914 B4GALNT1Q00973 533 aa26.93■■□□□ 1.9
SMAD4-213ENST00000591914 OLIG2Q13516 323 aa26.93■■□□□ 1.9
SMAD4-213ENST00000591914 ATP13A5Q4VNC0 1218 aa26.93■■□□□ 1.9
SMAD4-213ENST00000591914 SEL1L2Q5TEA6 688 aa26.93■■□□□ 1.9
SMAD4-213ENST00000591914 APOL2Q9BQE5 337 aa26.93■■□□□ 1.9
SMAD4-213ENST00000591914 ACP5P13686 325 aa26.92■■□□□ 1.9
SMAD4-213ENST00000591914 SPAM1P38567 509 aa26.92■■□□□ 1.9
SMAD4-213ENST00000591914 B3GNT8Q7Z7M8 397 aa26.92■■□□□ 1.9
SMAD4-213ENST00000591914 TMEM121Q9BTD3 319 aa26.92■■□□□ 1.9
SMAD4-213ENST00000591914 PKP3Q9Y446 797 aa26.92■■□□□ 1.9
SMAD4-213ENST00000591914 RHPN2P1A8MT19 583 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 BUD23O43709 281 aaKnown RBP26.91■■□□□ 1.9
SMAD4-213ENST00000591914 TLX3O43711 291 aaPredicted RBP26.91■■□□□ 1.9
SMAD4-213ENST00000591914 VEGFDO43915 354 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 EML2O95834 649 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 GDF10P55107 478 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 MSLNQ13421 630 aaPredicted RBP26.91■■□□□ 1.9
SMAD4-213ENST00000591914 RPS6KA1Q15418 735 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 PARP6Q2NL67 630 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 TBC1D25Q3MII6 688 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 KHDC1Q4VXA5 237 aaKnown RBP26.91■■□□□ 1.9
SMAD4-213ENST00000591914 DENND5AQ6IQ26 1287 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 IGF2-ASQ6U949 168 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 ARHGEF18Q6ZSZ5 1173 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 LSMEM2Q8N112 164 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 SFRP1Q8N474 314 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 SNIP1Q8TAD8 396 aaKnown RBP26.91■■□□□ 1.9
SMAD4-213ENST00000591914 ATG4AQ8WYN0 398 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 ALS2CR12Q96Q35 445 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 ARNT2Q9HBZ2 717 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 TBC1D29Q9UFV1 150 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 SATB2Q9UPW6 733 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 KCNK6Q9Y257 313 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 ARL5AQ9Y689 179 aa26.91■■□□□ 1.9
SMAD4-213ENST00000591914 URB1O60287 2271 aaKnown RBP26.91■■□□□ 1.9
SMAD4-213ENST00000591914 A0A087WV48 116 aa26.9■■□□□ 1.9
SMAD4-213ENST00000591914 A6NCN8 305 aa26.9■■□□□ 1.9
SMAD4-213ENST00000591914 GAPDHSO14556 408 aaPredicted RBP26.9■■□□□ 1.9
SMAD4-213ENST00000591914 B4GAT1O43505 415 aa26.9■■□□□ 1.9
SMAD4-213ENST00000591914 MTX2O75431 263 aa26.9■■□□□ 1.9
SMAD4-213ENST00000591914 ACTN2P35609 894 aa26.9■■□□□ 1.9
SMAD4-213ENST00000591914 GPR3P46089 330 aa26.9■■□□□ 1.9
SMAD4-213ENST00000591914 TAF1AQ15573 450 aaPredicted RBP26.9■■□□□ 1.9
SMAD4-213ENST00000591914 C3orf38Q5JPI3 329 aa26.9■■□□□ 1.9
SMAD4-213ENST00000591914 KCTD11Q693B1 232 aa26.9■■□□□ 1.9
SMAD4-213ENST00000591914 FAM151BQ6UXP7 276 aa26.9■■□□□ 1.9
SMAD4-213ENST00000591914 SLC13A5Q86YT5 568 aaPredicted RBP26.9■■□□□ 1.9
SMAD4-213ENST00000591914 RTP4Q96DX8 246 aa26.9■■□□□ 1.9
SMAD4-213ENST00000591914 LIN37Q96GY3 246 aaPredicted RBP26.9■■□□□ 1.9
SMAD4-213ENST00000591914 TBL1YQ9BQ87 522 aa26.9■■□□□ 1.9
SMAD4-213ENST00000591914 FRMD8P1Q9BZ68 369 aaPredicted RBP26.9■■□□□ 1.9
SMAD4-213ENST00000591914 PCDHGA8Q9Y5G5 932 aa26.9■■□□□ 1.9
SMAD4-213ENST00000591914 UNC13CQ8NB66 2214 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms