RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ZNF398Q8TD17 642 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 GPBAR1Q8TDU6 330 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 EID2BQ96D98 161 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 COX14Q96I36 57 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 DEPDC7Q96QD5 511 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 ZCCHC2Q9C0B9 1178 aaKnown RBP9.98□□□□□ -0.81
BRCA1-227ENST00000591849 IL26Q9NPH9 171 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 RAB6BQ9NRW1 208 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 IL17CQ9P0M4 197 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 PAK5Q9P286 719 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 ATXN10Q9UBB4 475 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 CNOT6Q9ULM6 557 aaKnown RBP9.98□□□□□ -0.81
BRCA1-227ENST00000591849 DRG1Q9Y295 367 aaKnown RBP9.98□□□□□ -0.81
BRCA1-227ENST00000591849 ZKSCAN5Q9Y2L8 839 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 ARL5AQ9Y689 179 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 OAS3Q9Y6K5 1087 aaKnown RBP9.98□□□□□ -0.81
BRCA1-227ENST00000591849 DMXL2Q8TDJ6 3036 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 FREM2Q5SZK8 3169 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 TRBV23OR9-2A0A075B6M9 112 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 LY6G6EA0A0G2JKS1 128 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 ERI2A8K979 691 aaKnown RBP9.97□□□□□ -0.81
BRCA1-227ENST00000591849 C1QTNF9BB2RNN3 333 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 KMOO15229 486 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 VEGFDO43915 354 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 UGT1A9O60656 530 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 MTX2O75431 263 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 AP2A1O95782 977 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 FUCA1P04066 466 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 C1QTNF9P0C862 333 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 ACP5P13686 325 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 VCLP18206 1134 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 UGT1A6P19224 532 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 UGT1A1P22309 533 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 UGT1A4P22310 534 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 AKT1P31749 480 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 UGT1A3P35503 534 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 UGT1A5P35504 534 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 HADHAP40939 763 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 TMPRSS15P98073 1019 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 INSM1Q01101 510 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-227ENST00000591849 LRP8Q14114 963 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 OASLQ15646 514 aaKnown RBP9.97□□□□□ -0.81
BRCA1-227ENST00000591849 INSCQ1MX18 579 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 ATP13A5Q4VNC0 1218 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 C14orf28Q4W4Y0 310 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 PERM1Q5SV97 790 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 LDLRAP1Q5SW96 308 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 OGFOD3Q6PK18 319 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 CRTC3Q6UUV7 619 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 C4orf22Q6V702 233 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 PTCD2Q8WV60 388 aaKnown RBP9.97□□□□□ -0.81
BRCA1-227ENST00000591849 CCDC74AQ96AQ1 378 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 RTP4Q96DX8 246 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 DCUN1D1Q96GG9 259 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 CCDC3Q9BQI4 270 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 GORASP1Q9BQQ3 440 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 ZMYND15Q9H091 742 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 KCNF1Q9H3M0 494 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 OSGEPL1Q9H4B0 414 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 STN1Q9H668 368 aaKnown RBP9.97□□□□□ -0.81
BRCA1-227ENST00000591849 ASB8Q9H765 288 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 UGT1A7Q9HAW7 530 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 UGT1A10Q9HAW8 530 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 UGT1A8Q9HAW9 530 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 ETNK1Q9HBU6 452 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 SPATS2LQ9NUQ6 558 aaKnown RBP9.97□□□□□ -0.81
BRCA1-227ENST00000591849 LRIT1Q9P2V4 623 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 NFKBIL1Q9UBC1 381 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-227ENST00000591849 CRLS1Q9UJA2 301 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 APPL1Q9UKG1 709 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 WASF3Q9UPY6 502 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 KCNK6Q9Y257 313 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 PLEKHM1Q9Y4G2 1056 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 AK5Q9Y6K8 562 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 SLC30A1Q9Y6M5 507 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 U3KQA8 63 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 ACACAQ13085 2346 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 ANKRD36A6QL64 1941 aa9.97□□□□□ -0.81
BRCA1-227ENST00000591849 TP53BP1Q12888 1972 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-227ENST00000591849 TDRD6O60522 2096 aaKnown RBP9.97□□□□□ -0.81
BRCA1-227ENST00000591849 FAM221BA6H8Z2 402 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 TRABD2BA6NFA1 517 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 GPR89AB7ZAQ6 455 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 NUAK1O60285 661 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 ECEL1O95672 775 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 GPR89BP0CG08 455 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 RALBP11234 206 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 SLC2A4P14672 509 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 ETS1P14921 441 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 GLB1P16278 677 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 ZNF8P17098 575 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-227ENST00000591849 MSH3P20585 1137 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 ITGALP20701 1170 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 ALDH4A1P30038 563 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 KCNJ1P48048 391 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 MAZP56270 477 aaKnown RBP9.96□□□□□ -0.82
BRCA1-227ENST00000591849 GNG11P61952 73 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 CDH17Q12864 832 aa9.96□□□□□ -0.82
BRCA1-227ENST00000591849 TMEM115Q12893 351 aaPredicted RBP9.96□□□□□ -0.82
BRCA1-227ENST00000591849 LAMB3Q13751 1172 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms