RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 C2orf81A6NN90 581 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 STX7O15400 261 aaKnown RBP16.23■□□□□ 0.19
CIRBP-233ENST00000591622 GRID2O43424 1007 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 USP12O75317 370 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 ECEL1O95672 775 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 PNLIPP16233 465 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 ZNF8P17098 575 aaPredicted RBP16.23■□□□□ 0.19
CIRBP-233ENST00000591622 SPAM1P38567 509 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 MSLNQ13421 630 aaPredicted RBP16.23■□□□□ 0.19
CIRBP-233ENST00000591622 SPARCL1Q14515 664 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 RTP5Q14D33 572 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 TAF1AQ15573 450 aaPredicted RBP16.23■□□□□ 0.19
CIRBP-233ENST00000591622 ISXQ2M1V0 245 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 P3H1Q32P28 736 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 ATP13A5Q4VNC0 1218 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 ZNF648Q5T619 568 aaPredicted RBP16.23■□□□□ 0.19
CIRBP-233ENST00000591622 KCTD11Q693B1 232 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 DENND5AQ6IQ26 1287 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 RBM44Q6ZP01 1051 aaKnown RBP16.23■□□□□ 0.19
CIRBP-233ENST00000591622 ADGRG6Q86SQ4 1221 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 PROSER1Q86XN7 944 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 NAGSQ8N159 534 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 BRSK1Q8TDC3 778 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 C1orf54Q8WWF1 131 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 TBL1YQ9BQ87 522 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 PCDHB1Q9Y5F3 818 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 ARL5AQ9Y689 179 aa16.23■□□□□ 0.19
CIRBP-233ENST00000591622 EPG5Q9HCE0 2579 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 GLYATL1P3A0A0U1RQE8 302 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 TAF4O00268 1085 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 NTN3O00634 580 aaPredicted RBP16.22■□□□□ 0.19
CIRBP-233ENST00000591622 CHUKO15111 745 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 VEGFDO43915 354 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 LPOP22079 712 aaPredicted RBP16.22■□□□□ 0.19
CIRBP-233ENST00000591622 MAZP56270 477 aaKnown RBP16.22■□□□□ 0.19
CIRBP-233ENST00000591622 CCL7P80098 99 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 SPIDRQ14159 915 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 PTPRCAPQ14761 206 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 CHRNA6Q15825 494 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 FAM151BQ6UXP7 276 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 ARL14Q8N4G2 192 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 PATE1Q8WXA2 126 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 GRAMD1AQ96CP6 724 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 SYNDIG1Q9H7V2 258 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 LRRC40Q9H9A6 602 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 FEZ2Q9UHY8 353 aaPredicted RBP16.22■□□□□ 0.19
CIRBP-233ENST00000591622 ZNF148Q9UQR1 794 aa16.22■□□□□ 0.19
CIRBP-233ENST00000591622 TPRP12270 2363 aaKnown RBP16.22■□□□□ 0.19
CIRBP-233ENST00000591622 A0A1W2PQM1 296 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 GAPDHSO14556 408 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-233ENST00000591622 PSMD3O43242 534 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 MTX2O75431 263 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 CRTAMO95727 393 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 RPLP0P05388 317 aaKnown RBP16.21■□□□□ 0.19
CIRBP-233ENST00000591622 ACP5P13686 325 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 PDE1BQ01064 536 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 SNX1Q13596 522 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 ITGA9Q13797 1035 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 SIX1Q15475 284 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-233ENST00000591622 CCNG2Q16589 344 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 KHDC1Q4VXA5 237 aaKnown RBP16.21■□□□□ 0.19
CIRBP-233ENST00000591622 ZNF438Q7Z4V0 828 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 SPRED1Q7Z699 444 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 CCNJLQ8IV13 435 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 Q8N9G6 341 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-233ENST00000591622 GDAP1Q8TB36 358 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 GFM1Q96RP9 751 aaKnown RBP16.21■□□□□ 0.19
CIRBP-233ENST00000591622 LRRN3Q9H3W5 708 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 KCTD3Q9Y597 815 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 AK5Q9Y6K8 562 aa16.21■□□□□ 0.19
CIRBP-233ENST00000591622 USP24Q9UPU5 2620 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 BPTFQ12830 3046 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 IGF2RP11717 2491 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 SRRM3A6NNA2 597 aaPredicted RBP16.2■□□□□ 0.18
CIRBP-233ENST00000591622 RHPN2P1A8MT19 583 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 UGT1A9O60656 530 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 CDK14O94921 469 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 AP2A1O95782 977 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 EML2O95834 649 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 IFNB1P01574 187 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 FGGP02679 453 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 UGT1A6P19224 532 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 UGT1A1P22309 533 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 UGT1A4P22310 534 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 UGT1A3P35503 534 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 UGT1A5P35504 534 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 PDX1P52945 283 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 B4GALNT1Q00973 533 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 TMEM115Q12893 351 aaPredicted RBP16.2■□□□□ 0.18
CIRBP-233ENST00000591622 TAB3Q8N5C8 712 aaPredicted RBP16.2■□□□□ 0.18
CIRBP-233ENST00000591622 OR4K2Q8NGD2 314 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 MAIP1Q8WWC4 291 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 ATXN7L3BQ96GX2 97 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 C19orf43Q9BQ61 176 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 UGT1A7Q9HAW7 530 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 UGT1A10Q9HAW8 530 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 UGT1A8Q9HAW9 530 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 TBC1D29Q9UFV1 150 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 KCNK6Q9Y257 313 aa16.2■□□□□ 0.18
CIRBP-233ENST00000591622 ZKSCAN5Q9Y2L8 839 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms