RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 RTP4Q96DX8 246 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 FEM1CQ96JP0 617 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 PPP1R2P1Q96PQ5 205 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 SMIM14Q96QK8 99 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 FCRL5Q96RD9 977 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 KRT12Q99456 494 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 TBL1YQ9BQ87 522 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 GORASP1Q9BQQ3 440 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 TRIM51Q9BSJ1 452 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 MLPHQ9BV36 600 aaPredicted RBP6.41□□□□□ -1.38
VPS4B-205ENST00000591383 ADGRE3Q9BY15 652 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 KCNH6Q9H252 994 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 EPC1Q9H2F5 836 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 GSX1Q9H4S2 264 aaPredicted RBP6.41□□□□□ -1.38
VPS4B-205ENST00000591383 LRRC40Q9H9A6 602 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 USP29Q9HBJ7 922 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 FZD3Q9NPG1 666 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 ITM2CQ9NQX7 267 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 PIH1D1Q9NWS0 290 aaKnown RBP6.41□□□□□ -1.38
VPS4B-205ENST00000591383 PAK5Q9P286 719 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 NCDNQ9UBB6 729 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 DKK3Q9UBP4 350 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 ASIC3Q9UHC3 531 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 COQ6Q9Y2Z9 468 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 FADS3Q9Y5Q0 445 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF106Q9H2Y7 1883 aaKnown RBP6.41□□□□□ -1.38
VPS4B-205ENST00000591383 OTOGLQ3ZCN5 2332 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF292O60281 2723 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 A0A0J9YYE9 177 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 A0A0U1RQS6 177 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 A0A1W2PQ67 120 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 C5orf60A6NFR6 353 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 IGLON5A6NGN9 336 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 TRAFD1O14545 582 aaPredicted RBP6.4□□□□□ -1.38
VPS4B-205ENST00000591383 SHOXO15266 292 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 HTRA2O43464 458 aaPredicted RBP6.4□□□□□ -1.38
VPS4B-205ENST00000591383 AP1G1O43747 822 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 GCATO75600 419 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 PPM1BO75688 479 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 DNAJC8O75937 253 aaPredicted RBP6.4□□□□□ -1.38
VPS4B-205ENST00000591383 TRBC1P01850 177 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 KRT14P02533 472 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 CFIP05156 583 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 PCCBP05166 539 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 FGF1P05230 155 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 APRTP07741 180 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 CYP2A6P11509 494 aaPredicted RBP6.4□□□□□ -1.38
VPS4B-205ENST00000591383 C6P13671 934 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 CD247P20963 164 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 CNR2P34972 360 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 RPL22P35268 128 aaKnown RBP6.4□□□□□ -1.38
VPS4B-205ENST00000591383 FDFT1P37268 417 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 POLR2LP62875 67 aaKnown RBP6.4□□□□□ -1.38
VPS4B-205ENST00000591383 MRPS25P82663 173 aaKnown RBP6.4□□□□□ -1.38
VPS4B-205ENST00000591383 DR1Q01658 176 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 CDK18Q07002 472 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 RALGDSQ12967 914 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 ARHGEF7Q14155 803 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 IHHQ14623 411 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 ACOX1Q15067 660 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 SLC14A2Q15849 920 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 CNGA3Q16281 694 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 CYP1B1Q16678 543 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 UGP2Q16851 508 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 WHAMMP3Q1A5X7 153 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 TRIM61Q5EBN2 209 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 SIRPB2Q5JXA9 342 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 WDR45BQ5MNZ6 344 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 LRRC66Q68CR7 880 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 KIAA1161Q6NSJ0 714 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 CCDC70Q6NSX1 233 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 DRICH1Q6PGQ1 229 aaPredicted RBP6.4□□□□□ -1.38
VPS4B-205ENST00000591383 LAYNQ6UX15 382 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 DPPA4Q7L190 304 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 GLT6D1Q7Z4J2 308 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 STRA8Q7Z7C7 330 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 TSPAN33Q86UF1 283 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 HORMAD1Q86X24 394 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 SLC41A1Q8IVJ1 513 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 BLOC1S5Q8TDH9 187 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 PIGKQ92643 395 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 VOPP1Q96AW1 172 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 BIRC7Q96CA5 298 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 SERAC1Q96JX3 654 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 RUNDC3BQ96NL0 473 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 TRIB3Q96RU7 358 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 DUSP15Q9H1R2 295 aaPredicted RBP6.4□□□□□ -1.38
VPS4B-205ENST00000591383 TRIM39Q9HCM9 518 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 CYP4F12Q9HCS2 524 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 AASDHPPTQ9NRN7 309 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 VPS45Q9NRW7 570 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 WHRNQ9P202 907 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 EIF2B4Q9UI10 523 aaKnown RBP6.4□□□□□ -1.38
VPS4B-205ENST00000591383 CDC23Q9UJX2 597 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 GMEB2Q9UKD1 530 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 PHTF1Q9UMS5 762 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 SHOC2Q9UQ13 582 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 CA5BQ9Y2D0 317 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.4□□□□□ -1.38
VPS4B-205ENST00000591383 AAR2Q9Y312 384 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms