RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	BMP8B	P34820	402 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	ADAR	P55265	1226 aa	Known RBP	15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	POU4F1	Q01851	419 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	PCLAF	Q15004	111 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	CDKN3	Q16667	212 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	CARD16	Q5EG05	197 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	AFTPH	Q6ULP2	937 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318		Q6ZVU0	165 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	LYSMD3	Q7Z3D4	306 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	SPNS2	Q8IVW8	549 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	TDH	Q8IZJ6	230 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	FRS2	Q8WU20	508 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	CPEB1	Q9BZB8	566 aa	Known RBP	15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	C1orf21	Q9H246	121 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	EBF3	Q9H4W6	596 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	OBP2A	Q9NY56	170 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	IL17C	Q9P0M4	197 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318	WASF2	Q9Y6W5	498 aa		15.33	■□□□□ 0.04
DDX39A-209	ENST00000589318		H7C0S8	307 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	RNASEH1	O60930	286 aa	Known RBP	15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	ADH1C	P00326	375 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	STMN1	P16949	149 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	SERPINA4	P29622	427 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	DGKG	P49619	791 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	CHN2	P52757	468 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	STC1	P52823	247 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	CBX3	Q13185	183 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	PEX6	Q13608	980 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	TANGO2	Q6ICL3	276 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	MRNIP	Q6NTE8	343 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	ZNF549	Q6P9A3	640 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	TMEM151A	Q8N4L1	468 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	OR2A12	Q8NGT7	310 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	CYB5D2	Q8WUJ1	264 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	FAM161B	Q96MY7	647 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	FKBPL	Q9UIM3	349 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	ANKRD6	Q9Y2G4	727 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	SLC27A6	Q9Y2P4	619 aa		15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	MUC22	E2RYF6	1773 aa	Predicted RBP	15.32	■□□□□ 0.04
DDX39A-209	ENST00000589318	PEX1	O43933	1283 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	TULP3	O75386	442 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	E2F6	O75461	281 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	WISP3	O95389	354 aa	Predicted RBP	15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	HNRNPC	P07910	306 aa	Known RBP eCLIP	15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	POLR2E	P19388	210 aa	Known RBP	15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	HMGCL	P35914	325 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	CD97	P48960	835 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	DLG1	Q12959	904 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	SPIDR	Q14159	915 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	PTPRN	Q16849	979 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	CCDC153	Q494R4	210 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	FASTKD1	Q53R41	847 aa	Known RBP	15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	BORA	Q6PGQ7	559 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	RAPH1	Q70E73	1250 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	DENND4A	Q7Z401	1863 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	NUDCD3	Q8IVD9	361 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	PLPP6	Q8IY26	295 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	RYBP	Q8N488	228 aa	Predicted RBP	15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	CHST14	Q8NCH0	376 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	JADE3	Q92613	823 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	GPR78	Q96P69	363 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	BPIFA1	Q9NP55	256 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	HPS4	Q9NQG7	708 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	RHBDL2	Q9NX52	303 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	CLEC1B	Q9P126	229 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	COPG2	Q9UBF2	871 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	CDH7	Q9ULB5	785 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	SPTBN5	Q9NRC6	3674 aa	Known RBP	15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	CAPN8	A6NHC0	703 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	WASH3P	C4AMC7	463 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	STX7	O15400	261 aa	Known RBP	15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	BNIP3L	O60238	219 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	NFATC1	O95644	943 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	POP4	O95707	220 aa	Known RBP	15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	SBK3	P0C264	359 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	HNF1B	P35680	557 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	CDKN1C	P49918	316 aa	Predicted RBP	15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	VASP	P50552	380 aa	Predicted RBP	15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	CDKN2D	P55273	166 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	TIAL1	Q01085	375 aa	Known RBP eCLIP	15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	ADAM15	Q13444	863 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	CHI3L2	Q15782	390 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	HECTD2	Q5U5R9	776 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	VIT	Q6UXI7	678 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	PIANP	Q8IYJ0	282 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	TNS4	Q8IZW8	715 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	KCTD4	Q8WVF5	259 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	LYSMD1	Q96S90	227 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	SLX1A	Q9BQ83	275 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	TSSK1B	Q9BXA7	367 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	KLHL4	Q9C0H6	718 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	SUV39H2	Q9H5I1	410 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	TLK1	Q9UKI8	766 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	CRYL1	Q9Y2S2	319 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	ACOT9	Q9Y305	439 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	PPIL1	Q9Y3C6	166 aa		15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	MTF2	Q9Y483	593 aa	Predicted RBP	15.31	■□□□□ 0.04
DDX39A-209	ENST00000589318	TTC34	A8MYJ7	566 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318		G3V2L1	256 aa		15.3	■□□□□ 0.04
DDX39A-209	ENST00000589318	FGF3	P11487	239 aa	Predicted RBP	15.3	■□□□□ 0.04

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