RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PRKCIP41743 596 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 LEPRP48357 1165 aaKnown RBP11.74□□□□□ -0.53
BRCA1-225ENST00000586385 SPINT3P49223 89 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 ARSEP51690 589 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 MC1RQ01726 317 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 GALNT2Q10471 571 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 KLRB1Q12918 225 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 KIR2DS5Q14953 304 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 TCTN3Q6NUS6 607 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 PPP1R2P3Q6NXS1 205 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 SLC9B2Q86UD5 537 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 CPNE8Q86YQ8 564 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 BBS5Q8N3I7 341 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 GALNT6Q8NCL4 622 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 FAM71BQ8TC56 605 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 TEKT4Q8WW24 435 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 AIPL1Q9NZN9 384 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 ZNF624Q9P2J8 865 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-225ENST00000586385 ATXN10Q9UBB4 475 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 SLC23A2Q9UGH3 650 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 KCTD3Q9Y597 815 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 NBPF19A0A087WUL8 3843 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 GOLGA6L3A6NEY3 463 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 KIF1CO43896 1103 aaKnown RBP11.73□□□□□ -0.53
BRCA1-225ENST00000586385 NUAK1O60285 661 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 UTP20O75691 2785 aaKnown RBP11.73□□□□□ -0.53
BRCA1-225ENST00000586385 TIAF1O95411 115 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 HLA-DQB2P05538 268 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 MMP2P08253 660 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 CCDC172P0C7W6 258 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 BRAFP15056 766 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 TYRP1P17643 537 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 MAN1A1P33908 653 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 DLSTP36957 453 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 GARSP41250 739 aaKnown RBP11.73□□□□□ -0.53
BRCA1-225ENST00000586385 SLC19A1P41440 591 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 PPM1FP49593 454 aaPredicted RBP11.73□□□□□ -0.53
BRCA1-225ENST00000586385 CLCNKAP51800 687 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 ERV3-1Q14264 604 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 ASIC2Q16515 512 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 QPCTQ16769 361 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 NCBP2-AS2Q69YL0 99 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 TMEM26Q6ZUK4 368 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 RAVER1Q8IY67 606 aaKnown RBP11.73□□□□□ -0.53
BRCA1-225ENST00000586385 LPCAT1Q8NF37 534 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 SH3KBP1Q96B97 665 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 RUFY1Q96T51 708 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 ULBP3Q9BZM4 244 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 POLR1EQ9GZS1 481 aaKnown RBP11.73□□□□□ -0.53
BRCA1-225ENST00000586385 BRD8Q9H0E9 1235 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 ISCUQ9H1K1 167 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 EPB41L1Q9H4G0 881 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 FAM83DQ9H4H8 585 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 ZNF768Q9H5H4 540 aaKnown RBP11.73□□□□□ -0.53
BRCA1-225ENST00000586385 RMI1Q9H9A7 625 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 UCK1Q9HA47 277 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 UNC79Q9P2D8 2635 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 TLK1Q9UKI8 766 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 ICE1Q9Y2F5 2266 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 GTF3C3Q9Y5Q9 886 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 SCINQ9Y6U3 715 aa11.73□□□□□ -0.53
BRCA1-225ENST00000586385 SPTBN1Q01082 2364 aaKnown RBP11.72□□□□□ -0.53
BRCA1-225ENST00000586385 C1orf232A0A0U1RR37 186 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 MATN3O15232 486 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 GRID2O43424 1007 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 DNAJB5O75953 348 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 KIAA0754O94854 1291 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 SKILP12757 684 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 SERPINB6P35237 376 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 SEPHS1P49903 392 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 PMS2P54278 862 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 EPHB1P54762 984 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 FOXM1Q08050 763 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 ITKQ08881 620 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 SLC10A2Q12908 348 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-225ENST00000586385 PAFAH1B3Q15102 231 aaKnown RBP11.72□□□□□ -0.53
BRCA1-225ENST00000586385 ATP13A4Q4VNC1 1196 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 KHDC1Q4VXA5 237 aaKnown RBP11.72□□□□□ -0.53
BRCA1-225ENST00000586385 C6orf15Q6UXA7 325 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-225ENST00000586385 CLEC17AQ6ZS10 378 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 ASB18Q6ZVZ8 466 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 ADGRG6Q86SQ4 1221 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 PLXDC1Q8IUK5 500 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 LRRC49Q8IUZ0 686 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 AOPEPQ8N6M6 819 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 NIPA2Q8N8Q9 360 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 ANKRD20A12PQ8NF67 263 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 NSMCE1Q8WV22 266 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 RSC1A1Q92681 617 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 TSGA13Q96PP4 275 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 OR6C1Q96RD1 312 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 TRIM55Q9BYV6 548 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-225ENST00000586385 OR2AG1Q9H205 316 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 CARD9Q9H257 536 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 AKIRIN1Q9H9L7 192 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-225ENST00000586385 PCDH9Q9HC56 1237 aa11.72□□□□□ -0.53
BRCA1-225ENST00000586385 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
BRCA1-225ENST00000586385 RBM22Q9NW64 420 aaKnown RBP eCLIP11.72□□□□□ -0.53
BRCA1-225ENST00000586385 TMPRSS11EQ9UL52 423 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms