RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 THUMPD3Q9BV44 507 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 FAM126AQ9BYI3 521 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 TRIM8Q9BZR9 551 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 Q9H521 79 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 NOL11Q9H8H0 719 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 POMPQ9Y244 141 aa12.37□□□□□ -0.43
SMARCA4-208ENST00000585799 LEFTY2O00292 366 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 HMGA1P17096 107 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 HOXB8P17481 243 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 HOXC13P31276 330 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 GGT5P36269 586 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 ATP6AP1LQ52LC2 224 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 CAPRIN2Q6IMN6 1127 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 CHST9Q7L1S5 443 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 TTC30BQ8N4P2 665 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 OR6Y1Q8NGX8 325 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 COPS8Q99627 209 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 PCDHAC1Q9H158 963 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 OPTCQ9UBM4 332 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 SCN10AQ9Y5Y9 1956 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 ANK1P16157 1881 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 WASH4PA8MWX3 477 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 XYLBO75191 536 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 ZNF37AP17032 561 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 OGNP20774 298 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 ATP6V0D1P61421 351 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 WDR5P61964 334 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 SULT2A1Q06520 285 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 ABRQ12979 859 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 OR4D1Q15615 310 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 MAVSQ7Z434 540 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 STK40Q8N2I9 435 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 POF1BQ8WVV4 589 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 GFM2Q969S9 779 aaKnown RBP12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 TCEAL4Q96EI5 215 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 MED8Q96G25 268 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 SEPHS2Q99611 448 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 C17orf80Q9BSJ5 609 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 SLC25A23Q9BV35 468 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 LINC00597Q9H2U6 94 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 APPL1Q9UKG1 709 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 ZNF839A8K0R7 811 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 NPHS1O60500 1241 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 MAGEC1O60732 1142 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 XRCC1P18887 633 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 IMPDH1P20839 514 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 CTSOP43234 321 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 THOP1P52888 689 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 RAB33AQ14088 237 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 LY6G5CQ5SRR4 150 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 DOK6Q6PKX4 331 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 AMIGO2Q86SJ2 522 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 TSPAN33Q86UF1 283 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 TMEM25Q86YD3 366 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 YAF2Q8IY57 180 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 RBFAQ8N0V3 343 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 FBXW8Q8N3Y1 598 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 SHKBP1Q8TBC3 707 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 CNBD2Q96M20 576 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 RTKNQ9BST9 563 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 IGSF5Q9NSI5 407 aa12.36□□□□□ -0.43
SMARCA4-208ENST00000585799 A0A0J9YYE9 177 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 A0A1W2PQ67 120 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 SAC3D1A6NKF1 404 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 H3BMM5 538 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 SEC22BO75396 215 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 ATP5BP06576 529 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 AOC1P19801 751 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 FRG1Q14331 258 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 NRF1Q16656 503 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 PLEKHG6Q3KR16 790 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 METTL21CQ5VZV1 264 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 IYDQ6PHW0 289 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 ELMO1Q92556 727 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 BADQ92934 168 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 VPS33AQ96AX1 596 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 PYCR2Q96C36 320 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 WRAP53Q9BUR4 548 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 ATG10Q9H0Y0 220 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 MMADHCQ9H3L0 296 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 GID8Q9NWU2 228 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 LMCD1Q9NZU5 365 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 TRIM24O15164 1050 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 GRID2O43424 1007 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 PAPSS2O95340 614 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 EPOP01588 193 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 MMP2P08253 660 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 ATP6V1B1P15313 513 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 MSH3P20585 1137 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 KCNC1P48547 511 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 POLD2P49005 469 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 CCNHP51946 323 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 AP1S1P61966 158 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 ARF5P84085 180 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 CACNG1Q06432 222 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 SLC20A2Q08357 652 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 CTC1Q2NKJ3 1217 aa12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 FNDC3BQ53EP0 1204 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-208ENST00000585799 ISCA2Q86U28 154 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms