RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 SPARCL1Q14515 664 aa20.57■□□□□ 0.88
TOP3A-218ENST00000584669 PRPSAP1Q14558 356 aa20.57■□□□□ 0.88
TOP3A-218ENST00000584669 PYCR3Q53H96 274 aa20.57■□□□□ 0.88
TOP3A-218ENST00000584669 ZNF648Q5T619 568 aaPredicted RBP20.57■□□□□ 0.88
TOP3A-218ENST00000584669 FOXR1Q6PIV2 292 aa20.57■□□□□ 0.88
TOP3A-218ENST00000584669 LSMEM2Q8N112 164 aa20.57■□□□□ 0.88
TOP3A-218ENST00000584669 UBE2Q2Q8WVN8 375 aa20.57■□□□□ 0.88
TOP3A-218ENST00000584669 ZNF578Q96N58 590 aaPredicted RBP20.57■□□□□ 0.88
TOP3A-218ENST00000584669 OR2M4Q96R27 311 aa20.57■□□□□ 0.88
TOP3A-218ENST00000584669 UBL7Q96S82 380 aaPredicted RBP20.57■□□□□ 0.88
TOP3A-218ENST00000584669 TLR10Q9BXR5 811 aa20.57■□□□□ 0.88
TOP3A-218ENST00000584669 PRORYQ9H606 182 aa20.57■□□□□ 0.88
TOP3A-218ENST00000584669 RAD18Q9NS91 495 aa20.57■□□□□ 0.88
TOP3A-218ENST00000584669 SPATS2LQ9NUQ6 558 aaKnown RBP20.57■□□□□ 0.88
TOP3A-218ENST00000584669 TRNAU1APQ9NX07 287 aaKnown RBP20.57■□□□□ 0.88
TOP3A-218ENST00000584669 SATB2Q9UPW6 733 aa20.57■□□□□ 0.88
TOP3A-218ENST00000584669 AAR2Q9Y312 384 aaKnown RBP20.57■□□□□ 0.88
TOP3A-218ENST00000584669 PRKAB1Q9Y478 270 aa20.57■□□□□ 0.88
TOP3A-218ENST00000584669 BPTFQ12830 3046 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 NOBOXO60393 691 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 METTL18O95568 372 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 HMGCLP35914 325 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 CTBSQ01459 385 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 TLE3Q04726 772 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 ILF3Q12906 894 aaKnown RBP eCLIP20.56■□□□□ 0.884e-6■■■□□ 15.5
TOP3A-218ENST00000584669 ZNF569Q5MCW4 686 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 OGFOD3Q6PK18 319 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 SLC30A9Q6PML9 568 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 RANBP10Q6VN20 620 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 ARHGEF18Q6ZSZ5 1173 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 GLT6D1Q7Z4J2 308 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 TRAM1L1Q8N609 369 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 ZNF248Q8NDW4 579 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 GPR156Q8NFN8 814 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 TRIM58Q8NG06 486 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 CCDC3Q9BQI4 270 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 GSDMCQ9BYG8 508 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 CDH19Q9H159 772 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 CARD9Q9H257 536 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 DPEP2Q9H4A9 486 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 TRABDQ9H4I3 376 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 HACD3Q9P035 362 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 RABGEF1Q9UJ41 708 aa20.56■□□□□ 0.88
TOP3A-218ENST00000584669 LIASO43766 372 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 DNAJC6O75061 913 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 ZNF189O75820 626 aaPredicted RBP20.55■□□□□ 0.88
TOP3A-218ENST00000584669 RBMS1P29558 406 aaKnown RBP20.55■□□□□ 0.88
TOP3A-218ENST00000584669 CXADRP78310 365 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 SNX1Q13596 522 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 PTPRCAPQ14761 206 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 TAB3Q8N5C8 712 aaPredicted RBP20.55■□□□□ 0.88
TOP3A-218ENST00000584669 C1orf54Q8WWF1 131 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 CCDC74AQ96AQ1 378 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 ZSCAN5AQ9BUG6 496 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 KCNF1Q9H3M0 494 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 THSD1Q9NS62 852 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 IL17CQ9P0M4 197 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 TAAR2Q9P1P5 351 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 VPS18Q9P253 973 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 ZNHIT2Q9UHR6 403 aa20.55■□□□□ 0.88
TOP3A-218ENST00000584669 SLC25A14O95258 325 aaPredicted RBP20.54■□□□□ 0.88
TOP3A-218ENST00000584669 SPIDRQ14159 915 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 OASLQ15646 514 aaKnown RBP20.54■□□□□ 0.88
TOP3A-218ENST00000584669 PARP6Q2NL67 630 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 GPR155Q7Z3F1 870 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 GALNT13Q8IUC8 556 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 KLHDC8BQ8IXV7 354 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 KCNE4Q8WWG9 221 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 GLYATL1Q969I3 302 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 PLEKHG4BQ96PX9 1271 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 TBL1YQ9BQ87 522 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 ATXN10Q9UBB4 475 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 TMPRSS11EQ9UL52 423 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 ENTPD2Q9Y5L3 495 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 ARL5AQ9Y689 179 aa20.54■□□□□ 0.88
TOP3A-218ENST00000584669 LAMA5O15230 3695 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 TCEA3O75764 348 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 DXOO77932 396 aaKnown RBP20.53■□□□□ 0.88
TOP3A-218ENST00000584669 CXCR5P32302 372 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 MSLNQ13421 630 aaPredicted RBP20.53■□□□□ 0.88
TOP3A-218ENST00000584669 SIX1Q15475 284 aaPredicted RBP20.53■□□□□ 0.88
TOP3A-218ENST00000584669 C14orf28Q4W4Y0 310 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 BROXQ5VW32 411 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 KCTD11Q693B1 232 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 DENND5AQ6IQ26 1287 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 ZDHHC1Q8WTX9 485 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 PATE1Q8WXA2 126 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 PPP1R2P1Q96PQ5 205 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 OR2AG1Q9H205 316 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 IL26Q9NPH9 171 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 ASCL3Q9NQ33 180 aa20.53■□□□□ 0.88
TOP3A-218ENST00000584669 A0A1W2PNU3 283 aaPredicted RBP20.52■□□□□ 0.88
TOP3A-218ENST00000584669 PMS2P1A4D2B8 440 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 GPR39O43194 453 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 MTX2O75431 263 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 PRB1P04280 392 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 ZNF8P17098 575 aaPredicted RBP20.52■□□□□ 0.88
TOP3A-218ENST00000584669 SPAM1P38567 509 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 ACTR1BP42025 376 aa20.52■□□□□ 0.88
TOP3A-218ENST00000584669 MAZP56270 477 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms