RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 LRRC49Q8IUZ0 686 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 ANKRD20A12PQ8NF67 263 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 PEBP4Q96S96 227 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 SLC25A23Q9BV35 468 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 POLR1EQ9GZS1 481 aaKnown RBP13.2□□□□□ -0.3
COPS3-218ENST00000584216 CARD9Q9H257 536 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 CLSTN2Q9H4D0 955 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 PDE7BQ9NP56 450 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 G3BP2Q9UN86 482 aaKnown RBP13.2□□□□□ -0.3
COPS3-218ENST00000584216 PRKAB1Q9Y478 270 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 PCDHGA9Q9Y5G4 932 aaKnown RBP13.2□□□□□ -0.3
COPS3-218ENST00000584216 UNC79Q9P2D8 2635 aa13.2□□□□□ -0.3
COPS3-218ENST00000584216 USP9XQ93008 2570 aaPredicted RBP13.2□□□□□ -0.3
COPS3-218ENST00000584216 SPENQ96T58 3664 aaKnown RBP13.19□□□□□ -0.3
COPS3-218ENST00000584216 GPR89AB7ZAQ6 455 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 GRID2O43424 1007 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 FZD6O60353 706 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 MTA2O94776 668 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 VIPP01282 170 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 GPR89BP0CG08 455 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 FGF5P12034 268 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 GFERP55789 205 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 RPL26P61254 145 aaKnown RBP13.19□□□□□ -0.3
COPS3-218ENST00000584216 UBE2IP63279 158 aaKnown RBP13.19□□□□□ -0.3
COPS3-218ENST00000584216 ITKQ08881 620 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 KRT31Q15323 416 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 PLEKHA7Q6IQ23 1121 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 RFLNAQ6ZTI6 216 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 TMEM26Q6ZUK4 368 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 PRSS42Q7Z5A4 293 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 RBM12BQ8IXT5 1001 aaKnown RBP13.19□□□□□ -0.3
COPS3-218ENST00000584216 AOPEPQ8N6M6 819 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 ZDHHC12Q96GR4 267 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 TGM7Q96PF1 710 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 AGAP2Q99490 1192 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 GPR87Q9BY21 358 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 BRD8Q9H0E9 1235 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 OSGEPL1Q9H4B0 414 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 NT5MQ9NPB1 228 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 LHX9Q9NQ69 397 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 RPL26L1Q9UNX3 145 aaKnown RBP13.19□□□□□ -0.3
COPS3-218ENST00000584216 SIK3Q9Y2K2 1263 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 MAP4K5Q9Y4K4 846 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 PCDHGB7Q9Y5F8 929 aa13.19□□□□□ -0.3
COPS3-218ENST00000584216 RGSL1A5PLK6 1076 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 NUAK1O60285 661 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 SPAG6O75602 509 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 PDHA1P08559 390 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 FERP16591 822 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 XRCC1P18887 633 aaPredicted RBP13.18□□□□□ -0.3
COPS3-218ENST00000584216 SEPHS1P49903 392 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 PDE1BQ01064 536 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 PTPRRQ15256 657 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 DPYSL2Q16555 572 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 UGT8Q16880 541 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 BOLA3Q53S33 107 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 MAMDC2Q7Z304 686 aaPredicted RBP13.18□□□□□ -0.3
COPS3-218ENST00000584216 TMEM135Q86UB9 458 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 BPHLQ86WA6 291 aaPredicted RBP13.18□□□□□ -0.3
COPS3-218ENST00000584216 HPS6Q86YV9 775 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 TP53INP2Q8IXH6 220 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 ARFGAP1Q8N6T3 406 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 ENOX1Q8TC92 643 aaKnown RBP13.18□□□□□ -0.3
COPS3-218ENST00000584216 CCHCR1Q8TD31 782 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 ELMO2Q96JJ3 720 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 FCRL4Q96PJ5 515 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 PLEKHG4BQ96PX9 1271 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 FAM83DQ9H4H8 585 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 ACTL8Q9H568 366 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 ACSS2Q9NR19 701 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 POT1Q9NUX5 634 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 PKD2L2Q9NZM6 624 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 RCOR3Q9P2K3 495 aaPredicted RBP13.18□□□□□ -0.3
COPS3-218ENST00000584216 ZNF451Q9Y4E5 1061 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 SCINQ9Y6U3 715 aa13.18□□□□□ -0.3
COPS3-218ENST00000584216 A1L4Q6 167 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 TMEM191CA6NGB0 347 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 SEMA7AO75326 666 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 DNAJB5O75953 348 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 SORBS2O94875 1100 aaKnown RBP13.17□□□□□ -0.3
COPS3-218ENST00000584216 PDGFAP04085 211 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 TYRP1P17643 537 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 PCK1P35558 622 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 CAPZBP47756 277 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 RPS15P62841 145 aaKnown RBP13.17□□□□□ -0.3
COPS3-218ENST00000584216 SH3BP2P78314 561 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 CHRNA6Q15825 494 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 HENMT1Q5T8I9 393 aaKnown RBP13.17□□□□□ -0.3
COPS3-218ENST00000584216 CACHD1Q5VU97 1274 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 CDKAL1Q5VV42 579 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 CYP4V2Q6ZWL3 525 aaPredicted RBP13.17□□□□□ -0.3
COPS3-218ENST00000584216 SYVN1Q86TM6 617 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 TEX26Q8N6G2 289 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 CT55Q8WUE5 264 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 LYSMD1Q96S90 227 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 CASS4Q9NQ75 786 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 KLC4Q9NSK0 619 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 OGFRQ9NZT2 677 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 AMACRQ9UHK6 382 aa13.17□□□□□ -0.3
COPS3-218ENST00000584216 CNOT6Q9ULM6 557 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms