RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 LRRC45Q96CN5 670 aa13.83□□□□□ -0.2
GGA3-215ENST00000582821 DEPDC7Q96QD5 511 aa13.83□□□□□ -0.2
GGA3-215ENST00000582821 TBL1YQ9BQ87 522 aa13.83□□□□□ -0.2
GGA3-215ENST00000582821 CCDC3Q9BQI4 270 aa13.83□□□□□ -0.2
GGA3-215ENST00000582821 BPIFA1Q9NP55 256 aa13.83□□□□□ -0.2
GGA3-215ENST00000582821 ATXN10Q9UBB4 475 aa13.83□□□□□ -0.2
GGA3-215ENST00000582821 ZNHIT2Q9UHR6 403 aa13.83□□□□□ -0.2
GGA3-215ENST00000582821 TMPRSS11EQ9UL52 423 aa13.83□□□□□ -0.2
GGA3-215ENST00000582821 DRG1Q9Y295 367 aaKnown RBP13.83□□□□□ -0.2
GGA3-215ENST00000582821 PKP3Q9Y446 797 aa13.83□□□□□ -0.2
GGA3-215ENST00000582821 PLEKHM1Q9Y4G2 1056 aa13.83□□□□□ -0.2
GGA3-215ENST00000582821 C2orf81A6NN90 581 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 GRID2O43424 1007 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 VEGFDO43915 354 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 METTL18O95568 372 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 SLC4A1P02730 911 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 LPOP22079 712 aaPredicted RBP13.82□□□□□ -0.2
GGA3-215ENST00000582821 SPAM1P38567 509 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 ACTR1BP42025 376 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 ACTR1AP61163 376 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 PDE1BQ01064 536 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 NR1D2Q14995 579 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 SIX1Q15475 284 aaPredicted RBP13.82□□□□□ -0.2
GGA3-215ENST00000582821 CCNG2Q16589 344 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 ISXQ2M1V0 245 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 ATP13A5Q4VNC0 1218 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 SLC30A9Q6PML9 568 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 RBM44Q6ZP01 1051 aaKnown RBP13.82□□□□□ -0.2
GGA3-215ENST00000582821 MARK2Q7KZI7 788 aaKnown RBP13.82□□□□□ -0.2
GGA3-215ENST00000582821 ZNF438Q7Z4V0 828 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 ADGRG6Q86SQ4 1221 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 PHYKPLQ8IUZ5 450 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 NAGSQ8N159 534 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 ARL14Q8N4G2 192 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 MAIP1Q8WWC4 291 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 ATG4AQ8WYN0 398 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 ZCCHC14Q8WYQ9 949 aaKnown RBP13.82□□□□□ -0.2
GGA3-215ENST00000582821 CCDC74AQ96AQ1 378 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 SUDS3Q9H7L9 328 aaPredicted RBP13.82□□□□□ -0.2
GGA3-215ENST00000582821 LRIT1Q9P2V4 623 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 RABGEF1Q9UJ41 708 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 ZMIZ1Q9ULJ6 1067 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 ZKSCAN5Q9Y2L8 839 aa13.82□□□□□ -0.2
GGA3-215ENST00000582821 PCYT1BQ9Y5K3 369 aaPredicted RBP13.82□□□□□ -0.2
GGA3-215ENST00000582821 ZNF106Q9H2Y7 1883 aaKnown RBP13.81□□□□□ -0.2
GGA3-215ENST00000582821 ERI2A8K979 691 aaKnown RBP13.81□□□□□ -0.2
GGA3-215ENST00000582821 B4DGG1 531 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 TAF4O00268 1085 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 GAPDHSO14556 408 aaPredicted RBP13.81□□□□□ -0.2
GGA3-215ENST00000582821 STX7O15400 261 aaKnown RBP13.81□□□□□ -0.2
GGA3-215ENST00000582821 ECEL1O95672 775 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 CRTAMO95727 393 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 ZNF8P17098 575 aaPredicted RBP13.81□□□□□ -0.2
GGA3-215ENST00000582821 B4GALNT1Q00973 533 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 CYP4F3Q08477 520 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 OLIG2Q13516 323 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 ITGA9Q13797 1035 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 CHRNA6Q15825 494 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 PROSER1Q86XN7 944 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 SFTPA2Q8IWL1 248 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 MDM1Q8TC05 714 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 C1orf54Q8WWF1 131 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 NXPE2Q96DL1 559 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 APOL2Q9BQE5 337 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 OR2AG1Q9H205 316 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 LRRN3Q9H3W5 708 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 LRRC40Q9H9A6 602 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 RNF215Q9Y6U7 377 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 BPTFQ12830 3046 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 PKD1L2Q7Z442 2459 aa13.81□□□□□ -0.2
GGA3-215ENST00000582821 DSPP15924 2871 aaKnown RBP13.81□□□□□ -0.2
GGA3-215ENST00000582821 GLYATL1P3A0A0U1RQE8 302 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 A0A1W2PQM1 296 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 USP12O75317 370 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 CSO75390 466 aaKnown RBP13.8□□□□□ -0.2
GGA3-215ENST00000582821 CDK14O94921 469 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 AP2A1O95782 977 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 FDFT1P37268 417 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 GPR3P46089 330 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 CCL7P80098 99 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 TMEM115Q12893 351 aaPredicted RBP13.8□□□□□ -0.2
GGA3-215ENST00000582821 SPIDRQ14159 915 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 SPARCL1Q14515 664 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 CLPPQ16740 277 aaPredicted RBP13.8□□□□□ -0.2
GGA3-215ENST00000582821 LDLRAP1Q5SW96 308 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 CHST15Q7LFX5 561 aaPredicted RBP13.8□□□□□ -0.2
GGA3-215ENST00000582821 LINC00523Q86TU6 105 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 REXO1L1PQ8IX06 675 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 ZNF398Q8TD17 642 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 PDLIM2Q96JY6 352 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 SMOXQ9NWM0 555 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 ZNF148Q9UQR1 794 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 JRKLQ9Y4A0 524 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 ARL5AQ9Y689 179 aa13.8□□□□□ -0.2
GGA3-215ENST00000582821 A6NCN8 305 aa13.79□□□□□ -0.2
GGA3-215ENST00000582821 PRR19A6NJB7 356 aa13.79□□□□□ -0.2
GGA3-215ENST00000582821 AGAP14A8MT82 685 aa13.79□□□□□ -0.2
GGA3-215ENST00000582821 TMX2-CTNND1H3BSU7 103 aa13.79□□□□□ -0.2
GGA3-215ENST00000582821 KMOO15229 486 aa13.79□□□□□ -0.2
GGA3-215ENST00000582821 ZW10O43264 779 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms