RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 HIC2Q96JB3 615 aa9.64□□□□□ -0.87
TOP3A-211ENST00000581536 LYSMD1Q96S90 227 aa9.64□□□□□ -0.87
TOP3A-211ENST00000581536 ADGRE3Q9BY15 652 aa9.64□□□□□ -0.87
TOP3A-211ENST00000581536 NRSN2Q9GZP1 204 aa9.64□□□□□ -0.87
TOP3A-211ENST00000581536 FAM83DQ9H4H8 585 aa9.64□□□□□ -0.87
TOP3A-211ENST00000581536 SYNDIG1Q9H7V2 258 aa9.64□□□□□ -0.87
TOP3A-211ENST00000581536 BPIFA1Q9NP55 256 aa9.64□□□□□ -0.87
TOP3A-211ENST00000581536 KCTD5Q9NXV2 234 aa9.64□□□□□ -0.87
TOP3A-211ENST00000581536 ATXN7L1Q9ULK2 861 aaPredicted RBP9.64□□□□□ -0.87
TOP3A-211ENST00000581536 RPL26L1Q9UNX3 145 aaKnown RBP9.64□□□□□ -0.87
TOP3A-211ENST00000581536 SLC17A4Q9Y2C5 497 aa9.64□□□□□ -0.87
TOP3A-211ENST00000581536 ENTPD2Q9Y5L3 495 aa9.64□□□□□ -0.87
TOP3A-211ENST00000581536 RNF215Q9Y6U7 377 aa9.64□□□□□ -0.87
TOP3A-211ENST00000581536 CHD6Q8TD26 2715 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 LOC285095A0A1B0GVY8 99 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 MACROD2A1Z1Q3 448 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 H7C0C1 242 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 PDE2AO00408 941 aaPredicted RBP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 NTN3O00634 580 aaPredicted RBP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 B4GAT1O43505 415 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 ECEL1O95672 775 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 EML2O95834 649 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 SLC4A1P02730 911 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 CTNNA2P26232 953 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 ITPKBP27987 946 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 TEAD1P28347 426 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 CDC25BP30305 580 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 CA5AP35218 305 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 EIF2S3P41091 472 aaKnown RBP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 ATP5OP48047 213 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 MAZP56270 477 aaKnown RBP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 WNT3AP56704 352 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 OTUD4Q01804 1114 aaKnown RBP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 OLIG2Q13516 323 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 HLTFQ14527 1009 aaKnown RBP eCLIP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 PTPRCAPQ14761 206 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 PPP2R5EQ16537 467 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 PYCR3Q53H96 274 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 HENMT1Q5T8I9 393 aaKnown RBP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 ALS2CLQ60I27 953 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 SLC30A9Q6PML9 568 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 BBS12Q6ZW61 710 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 ZNF765Q7L2R6 523 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 TMPRSS9Q7Z410 1059 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 B3GNT8Q7Z7M8 397 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 RNF217Q8TC41 542 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 ACTL9Q8TC94 416 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 ZDHHC1Q8WTX9 485 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 HTR3CQ8WXA8 447 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 SCARF2Q96GP6 870 aaPredicted RBP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 PRR11Q96HE9 360 aaPredicted RBP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 RBM41Q96IZ5 413 aaKnown RBP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 GORASP1Q9BQQ3 440 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 OSBPL8Q9BZF1 889 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 ZFYVE1Q9HBF4 777 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 MAGEE1Q9HCI5 957 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 LUC7LQ9NQ29 371 aaKnown RBP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 HAUS2Q9NVX0 235 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 NCKIPSDQ9NZQ3 722 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 TAAR2Q9P1P5 351 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 KLHL8Q9P2G9 620 aaPredicted RBP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 LRIT1Q9P2V4 623 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 IMPACTQ9P2X3 320 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 DKK4Q9UBT3 224 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 ZNHIT2Q9UHR6 403 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 TMPRSS11EQ9UL52 423 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.63□□□□□ -0.87
TOP3A-211ENST00000581536 PCDHGA11Q9Y5H2 935 aa9.63□□□□□ -0.87
TOP3A-211ENST00000581536 MGAQ8IWI9 3026 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 TCRBV7S2A1N4TA0A589 114 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 FIGNL2A6NMB9 653 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 PPM1DO15297 605 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 DDX3YO15523 660 aaKnown RBP9.62□□□□□ -0.87
TOP3A-211ENST00000581536 BUD23O43709 281 aaKnown RBP9.62□□□□□ -0.87
TOP3A-211ENST00000581536 DNAJC6O75061 913 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 NDST3O95803 873 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 FTCDO95954 541 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 AGTP01019 485 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 IVLP07476 585 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 BPIP17213 487 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 CA4P22748 312 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 PDX1P52945 283 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 RWDD2BP57060 319 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 OR1D5P58170 312 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 B4GALNT1Q00973 533 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 COL28A1Q2UY09 1125 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 C14orf28Q4W4Y0 310 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 SIRPB2Q5JXA9 342 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 FOXR1Q6PIV2 292 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 CHST15Q7LFX5 561 aaPredicted RBP9.62□□□□□ -0.87
TOP3A-211ENST00000581536 NAGSQ8N159 534 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 ARL14Q8N4G2 192 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 CCHCR1Q8TD31 782 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 NXPE2Q96DL1 559 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 NAF1Q96HR8 494 aaKnown RBP9.62□□□□□ -0.87
TOP3A-211ENST00000581536 QKIQ96PU8 341 aaKnown RBP eCLIP9.62□□□□□ -0.87
TOP3A-211ENST00000581536 DEPDC7Q96QD5 511 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 FCRL5Q96RD9 977 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 ANP32EQ9BTT0 268 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 SPATA16Q9BXB7 569 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms