RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 A0A0G2JNG1 304 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 C1orf232A0A0U1RR37 186 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 ZNF891A8MT65 544 aaPredicted RBP10.49□□□□□ -0.73
RFFL-209ENST00000581265 A8MU76 341 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 FADS2P1A8MWK0 482 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 KIR2DS3K7RE56 304 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 NUAK1O60285 661 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 HLA-DQB2P05538 268 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 F3P13726 295 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 SLC2A4P14672 509 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 MX2P20592 715 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 MAN1A1P33908 653 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 SSR1P43307 286 aaKnown RBP10.49□□□□□ -0.73
RFFL-209ENST00000581265 CLCNKAP51800 687 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 POLE2P56282 527 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 FOXK1P85037 733 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 ZBED6P86452 979 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 SLC10A2Q12908 348 aaPredicted RBP10.49□□□□□ -0.73
RFFL-209ENST00000581265 KIR2DS5Q14953 304 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 QPCTQ16769 361 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 HIST2H2BCQ6DN03 193 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 CEACAM20Q6UY09 585 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 SLC9B2Q86UD5 537 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 MAP7D3Q8IWC1 876 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 NLGN4XQ8N0W4 816 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 PQLC3Q8N755 202 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 AVL9Q8NBF6 648 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 LPCAT1Q8NF37 534 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 NLGN4YQ8NFZ3 816 aaPredicted RBP10.49□□□□□ -0.73
RFFL-209ENST00000581265 ZNF564Q8TBZ8 553 aaPredicted RBP10.49□□□□□ -0.73
RFFL-209ENST00000581265 CCHCR1Q8TD31 782 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 FAF2Q96CS3 445 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 IQCDQ96DY2 449 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 EFHD1Q9BUP0 239 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 MLPHQ9BV36 600 aaPredicted RBP10.49□□□□□ -0.73
RFFL-209ENST00000581265 EPN3Q9H201 632 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 CARD9Q9H257 536 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 TRIT1Q9H3H1 467 aaKnown RBP10.49□□□□□ -0.73
RFFL-209ENST00000581265 EPB41L1Q9H4G0 881 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 STN1Q9H668 368 aaKnown RBP10.49□□□□□ -0.73
RFFL-209ENST00000581265 PKD2L2Q9NZM6 624 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 CAPN11Q9UMQ6 739 aa10.49□□□□□ -0.73
RFFL-209ENST00000581265 TMEM184BQ9Y519 407 aaPredicted RBP10.49□□□□□ -0.73
RFFL-209ENST00000581265 NKX2-8O15522 239 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 GRID2O43424 1007 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 PROSCO94903 275 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 JCHAINP01591 159 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 MMP2P08253 660 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 ACP5P13686 325 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 GBE1Q04446 702 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 ABHD18Q0P651 414 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 KCNAB2Q13303 367 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 NFATC2Q13469 925 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 NFKBIBQ15653 356 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 SNAP47Q5SQN1 464 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 TIPARPQ7Z3E1 657 aaKnown RBP10.48□□□□□ -0.73
RFFL-209ENST00000581265 CCDC13Q8IYE1 715 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 CNTD1Q8N815 330 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 KIAA1143Q96AT1 154 aaPredicted RBP10.48□□□□□ -0.73
RFFL-209ENST00000581265 EID2BQ96D98 161 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 HDAC11Q96DB2 347 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 CTRCQ99895 268 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 ADGRE3Q9BY15 652 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 GPN2Q9H9Y4 310 aaPredicted RBP10.48□□□□□ -0.73
RFFL-209ENST00000581265 UCK1Q9HA47 277 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 TRIM39Q9HCM9 518 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 ATXN10Q9UBB4 475 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 CPNE7Q9UBL6 633 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 PLEKHB1Q9UF11 243 aaPredicted RBP10.48□□□□□ -0.73
RFFL-209ENST00000581265 NENFQ9UMX5 172 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 KCNK6Q9Y257 313 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 TTLL3Q9Y4R7 772 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 ADGRG1Q9Y653 693 aa10.48□□□□□ -0.73
RFFL-209ENST00000581265 FLNCQ14315 2725 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 LOC101059948A0A1B0GTJ6 334 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 LILRA5A6NI73 299 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 GPR89AB7ZAQ6 455 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 POLR1CO15160 346 aaPredicted RBP10.47□□□□□ -0.73
RFFL-209ENST00000581265 SNX2O60749 519 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 KRT38O76015 456 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 STK17BO94768 372 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 KRT7P08729 469 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 ANKRD34CP0C6C1 535 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 GPR89BP0CG08 455 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 ZNF8P17098 575 aaPredicted RBP10.47□□□□□ -0.73
RFFL-209ENST00000581265 XRCC1P18887 633 aaPredicted RBP10.47□□□□□ -0.73
RFFL-209ENST00000581265 CD86P42081 329 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 PPM1FP49593 454 aaPredicted RBP10.47□□□□□ -0.73
RFFL-209ENST00000581265 RIPPLY3P57055 190 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 TAS2R40P59535 323 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 UBE2IP63279 158 aaKnown RBP10.47□□□□□ -0.73
RFFL-209ENST00000581265 IFI35P80217 286 aaPredicted RBP10.47□□□□□ -0.73
RFFL-209ENST00000581265 FANCCQ00597 558 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 PPIDQ08752 370 aaKnown RBP10.47□□□□□ -0.73
RFFL-209ENST00000581265 CRTC2Q53ET0 693 aaPredicted RBP10.47□□□□□ -0.73
RFFL-209ENST00000581265 ATCAYQ86WG3 371 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 CPNE8Q86YQ8 564 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 PLXDC1Q8IUK5 500 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 PHYKPLQ8IUZ5 450 aa10.47□□□□□ -0.73
RFFL-209ENST00000581265 CCNYQ8ND76 341 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms