RNA–Protein interactions for RNA: ENST00000579531.5

MSI2-211, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-211	ENST00000579531	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	LEKR1	Q6ZMV7	388 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	SEPT14	Q6ZU15	432 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	RTL10	Q7L3V2	364 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	RRM2B	Q7LG56	351 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	MDGA2	Q7Z553	956 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	IGFN1	Q86VF2	1251 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	CHSY1	Q86X52	802 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	RHPN2	Q8IUC4	686 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	BLID	Q8IZY5	108 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	EXD3	Q8N9H8	876 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	APPL2	Q8NEU8	664 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	CD99L2	Q8TCZ2	262 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	RAB40A	Q8WXH6	277 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	ZUFSP	Q96AP4	578 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	TBC1D31	Q96DN5	1066 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	ZNF333	Q96JL9	665 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	C8orf76	Q96K31	380 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	FAM20A	Q96MK3	541 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	SPAG5	Q96R06	1193 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	RIT2	Q99578	217 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	SLC39A3	Q9BRY0	314 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	UPF3A	Q9H1J1	476 aa	Known RBP	4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	VAT1L	Q9HCJ6	419 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	OLA1	Q9NTK5	396 aa	Known RBP	4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	TBC1D22B	Q9NU19	505 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	CLIC5	Q9NZA1	410 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	ZNHIT2	Q9UHR6	403 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	FBXO2	Q9UK22	296 aa	Predicted RBP	4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	CFAP45	Q9UL16	551 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	DHDH	Q9UQ10	334 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	PDE4DIP	Q5VU43	2346 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	TTC3	P53804	2025 aa		4.12	□□□□□ -1.75
MSI2-211	ENST00000579531	NLRC5	Q86WI3	1866 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	GBF1	Q92538	1859 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	DPPA5	A6NC42	116 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	OR6C68	A6NDL8	312 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	C16orf96	A6NNT2	1141 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	TEX22	C9J3V5	150 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	DNM1L	O00429	736 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	DKC1	O60832	514 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	SMC2	O95347	1197 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	SNAI1	O95863	264 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	F9	P00740	461 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	CD4	P01730	458 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	PRKCG	P05129	697 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	MSN	P26038	577 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	GJB2	P29033	226 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	HOXC13	P31276	330 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	SFN	P31947	248 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	MTNR1A	P48039	350 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	TUB	P50607	506 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	BLK	P51451	505 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	CSE1L	P55060	971 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	NLRP5	P59047	1200 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	ST3GAL1	Q11201	340 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	FOXF2	Q12947	444 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	ACVR2B	Q13705	512 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	ZNF268	Q14587	947 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	NAA25	Q14CX7	972 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	PRICKLE4	Q2TBC4	344 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	USH1G	Q495M9	461 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	ZNF766	Q5HY98	468 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	CCDC122	Q5T0U0	273 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	SFMBT2	Q5VUG0	894 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	ARHGEF16	Q5VV41	709 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	TMEM268	Q5VZI3	342 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	TTC19	Q6DKK2	380 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	NCAPH2	Q6IBW4	605 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	MZT2B	Q6NZ67	158 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	SLC30A9	Q6PML9	568 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	METTL7B	Q6UX53	244 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	PACS1	Q6VY07	963 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	C1orf122	Q6ZSJ8	110 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	ARMCX2	Q7L311	632 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	NEK8	Q86SG6	692 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	CCDC83	Q8IWF9	413 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	PEX5L	Q8IYB4	626 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	KRT222	Q8N1A0	295 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	BOLL	Q8N9W6	283 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	C11orf65	Q8NCR3	313 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	OSR1	Q8TAX0	266 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	MIPOL1	Q8TD10	442 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	TRIB2	Q92519	343 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	CNOT9	Q92600	299 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	SAAL1	Q96ER3	474 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	ADAD1	Q96M93	576 aa	Known RBP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	ZNF347	Q96SE7	839 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	SH3GL1	Q99961	368 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	TREX2	Q9BQ50	279 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	IFT27	Q9BW83	186 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	PHF7	Q9BWX1	381 aa	Predicted RBP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	HDHD5	Q9BXW7	423 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	CPVL	Q9H3G5	476 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	ENTPD7	Q9NQZ7	604 aa		4.11	□□□□□ -1.75
MSI2-211	ENST00000579531	TMEM248	Q9NWD8	314 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms