RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 LOC101059948A0A1B0GTJ6 334 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 MFSD11O43934 449 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 CLDN7O95471 211 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 VIPP01282 170 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 MT-ND3P03897 115 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 ATP1A1P05023 1023 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 AMD1P17707 334 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 VCLP18206 1134 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 ANP32AP39687 249 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 STAT5AP42229 794 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 SPINT3P49223 89 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 DSC2Q02487 901 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 SLC25A11Q02978 314 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 TYRO3Q06418 890 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 FOXM1Q08050 763 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 KLRB1Q12918 225 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 PAFAH1B3Q15102 231 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 DEFB109BQ30KR1 87 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 ZFYVE27Q5T4F4 411 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 HENMT1Q5T8I9 393 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 PDPK2PQ6A1A2 396 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 C16orf46Q6P387 395 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 RBM12BQ8IXT5 1001 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 KCTD6Q8NC69 237 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 SEC14L1Q92503 715 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 IQCDQ96DY2 449 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 STAMBPL1Q96FJ0 436 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 TSGA13Q96PP4 275 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 SRPK1Q96SB4 655 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 AGAP2Q99490 1192 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 ZSCAN5AQ9BUG6 496 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 NUP85Q9BW27 656 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 ULBP3Q9BZM4 244 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 ZNF71Q9NQZ8 489 aaPredicted RBP14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 RPS6KL1Q9Y6S9 549 aa14.05□□□□□ -0.16
SMARCD2-205ENST00000577686 UBR5O95071 2799 aaPredicted RBP14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 NUAK1O60285 661 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 DLGAP3O95886 979 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 SERPINC1P01008 464 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 KRT7P08729 469 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 CCNYL3P0C7X3 344 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 SRSF1Q07955 248 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 IL11RAQ14626 422 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 PTPRRQ15256 657 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 INSCQ1MX18 579 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 FIGNQ5HY92 759 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 CCDC70Q6NSX1 233 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 C6orf15Q6UXA7 325 aaPredicted RBP14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 RFLNAQ6ZTI6 216 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 RASGRP3Q8IV61 690 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 CCNYQ8ND76 341 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 SYN2Q92777 582 aaPredicted RBP14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 SPATA16Q9BXB7 569 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 POLHQ9Y253 713 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 PRKAB1Q9Y478 270 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 SDK2Q58EX2 2172 aa14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 TLN1Q9Y490 2541 aaKnown RBP14.04□□□□□ -0.16
SMARCD2-205ENST00000577686 A6NCN8 305 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 PDZK1P1A8MUH7 402 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 KMOO15229 486 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 RASSF9O75901 435 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 UBXN7O94888 489 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 SLC25A14O95258 325 aaPredicted RBP14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 SERPING1P05155 500 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 SKILP12757 684 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 GP1BBP13224 206 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 TCF4P15884 667 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 OAS2P29728 719 aaKnown RBP14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 GJC1P36383 396 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 DLSTP36957 453 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 TNNT3P45378 269 aaPredicted RBP14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 DCDC1P59894 354 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 GTF2H3Q13889 308 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 ANO6Q4KMQ2 910 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 NCBP2-AS2Q69YL0 99 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 TMEM26Q6ZUK4 368 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 LRRTM4Q86VH4 590 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 CCDC13Q8IYE1 715 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 UNC5BQ8IZJ1 945 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 FAM26EQ8N5C1 309 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 TEX19Q8NA77 164 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 FAM71BQ8TC56 605 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 HDAC11Q96DB2 347 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 ZDHHC12Q96GR4 267 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 ABHD17AQ96GS6 310 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 C9orf72Q96LT7 481 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 SPRY4Q9C004 299 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 THAP2Q9H0W7 228 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 HSD3B7Q9H2F3 369 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 ZFYVE1Q9HBF4 777 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 TRIM39Q9HCM9 518 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 KLC4Q9NSK0 619 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 POT1Q9NUX5 634 aa14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 OAS3Q9Y6K5 1087 aaKnown RBP14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 ARHGEF17Q96PE2 2063 aaPredicted RBP14.03□□□□□ -0.16
SMARCD2-205ENST00000577686 A0A0U1RQS6 177 aa14.02□□□□□ -0.17
SMARCD2-205ENST00000577686 PRR19A6NJB7 356 aa14.02□□□□□ -0.17
SMARCD2-205ENST00000577686 ANKRD66B4E2M5 251 aa14.02□□□□□ -0.17
SMARCD2-205ENST00000577686 VEGFDO43915 354 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms