RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 OR2C1O95371 312 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 NTN1O95631 604 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 STARD3NLO95772 234 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 CYC1P08574 325 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 ACAA1P09110 424 aaPredicted RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 G6PDP11413 515 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 VPREB1P12018 145 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 GJA1P17302 382 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 ANXA7P20073 488 aaKnown RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 UGT1A1P22309 533 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 TKTP29401 623 aaKnown RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 TMPOP42166 694 aaKnown RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 MATR3P43243 847 aaKnown RBP eCLIP2.51□□□□□ -2.01
COPS3-213ENST00000577210 SLC15A1P46059 708 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 HTR6P50406 440 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 GPR143P51810 404 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 MFAP4P55083 255 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 SNX16P57768 344 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 DSCR9P59020 149 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 NLRP5P59047 1200 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 TAS2R38P59533 333 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 KRTAP10-9P60411 292 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 CEBPZQ03701 1054 aaKnown RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 TROAPQ12815 778 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 GRSF1Q12849 480 aaKnown RBP eCLIP2.51□□□□□ -2.01
COPS3-213ENST00000577210 STK4Q13043 487 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 GAGE5Q13069 117 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 GAGE6Q13070 117 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 MYBPHQ13203 477 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 KEAP1Q14145 624 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 MVPQ14764 893 aaKnown RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 ASIC2Q16515 512 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 SYT16Q17RD7 645 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 ASTE1Q2TB18 679 aaPredicted RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 ACCSLQ4AC99 568 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 CDONQ4KMG0 1287 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 TMEM35AQ53FP2 167 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 ASPRV1Q53RT3 343 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 KCNT1Q5JUK3 1230 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 SPECC1Q5M775 1068 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 KRT79Q5XKE5 535 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 GPR139Q6DWJ6 353 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 FAM109BQ6ICB4 259 aaPredicted RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 ANKRD54Q6NXT1 300 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 PAPD4Q6PIY7 484 aaKnown RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 KRT74Q7RTS7 529 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 ADGRA1Q86SQ6 560 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 CCDC190Q86UF4 302 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 GCSAMQ8N6F7 178 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 METTL27Q8N6F8 245 aaPredicted RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 LSMEM1Q8N8F7 131 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 POC5Q8NA72 575 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 TANKQ92844 425 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 APBB2Q92870 758 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 NEUROG1Q92886 237 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 LRRC59Q96AG4 307 aaKnown RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 PERPQ96FX8 193 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 IGSF21Q96ID5 467 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 ZNF479Q96JC4 524 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 ADGRG7Q96K78 797 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 C3orf30Q96M34 536 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 SERINC2Q96SA4 455 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 SMC6Q96SB8 1091 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 SLX1AQ9BQ83 275 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 NEURL2Q9BR09 285 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 KIFC3Q9BVG8 833 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 HRH4Q9H3N8 390 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 ZCCHC17Q9NP64 241 aaKnown RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 SLC35C2Q9NQQ7 365 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 TRMT1Q9NXH9 659 aaKnown RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 ARHGEF38Q9NXL2 777 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 MARCH4Q9P2E8 410 aaPredicted RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 SLC9A2Q9UBY0 812 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 FBXL17Q9UF56 701 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 SEC63Q9UGP8 760 aaKnown RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 AMACRQ9UHK6 382 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 RPS6KA6Q9UK32 745 aa2.51□□□□□ -2.01
COPS3-213ENST00000577210 TMEM184BQ9Y519 407 aaPredicted RBP2.51□□□□□ -2.01
COPS3-213ENST00000577210 PTPRCP08575 1304 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 AGAP14A8MT82 685 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 KRTAP29-1A8MX34 341 aaPredicted RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 J3KR12 359 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 SLC16A5O15375 505 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 AVILO75366 819 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 GJB3O75712 270 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 TPPPO94811 219 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 TPOP07202 933 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 GABRB1P18505 474 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 SP100P23497 879 aaPredicted RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 GCH1P30793 250 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 CCKARP32238 428 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 HADHAP40939 763 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 EIF2S3P41091 472 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 MSH2P43246 934 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 HOXA1P49639 335 aaPredicted RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 MMP14P50281 582 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 STAT2P52630 851 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 PNLIPRP2P54317 469 aa2.5□□□□□ -2.01
COPS3-213ENST00000577210 RRP1P56182 461 aaKnown RBP2.5□□□□□ -2.01
COPS3-213ENST00000577210 LINC00205P59089 165 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms