RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 DCAF7P61962 342 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 ADIPOQQ15848 244 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 LCN10Q6JVE6 187 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 GLDNQ6ZMI3 551 aaPredicted RBP5.13□□□□□ -1.59
NUP88-213ENST00000576862 RSRC2Q7L4I2 434 aaKnown RBP5.13□□□□□ -1.59
NUP88-213ENST00000576862 ATG9AQ7Z3C6 839 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 KMT5CQ86Y97 462 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 NGEFQ8N5V2 710 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 DNASE2BQ8WZ79 361 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 SGCDQ92629 289 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 CD101Q93033 1021 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 ZKSCAN4Q969J2 545 aaPredicted RBP5.13□□□□□ -1.59
NUP88-213ENST00000576862 PIGTQ969N2 578 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 CDCA5Q96FF9 252 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 EGLN2Q96KS0 407 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 C1orf74Q96LT6 269 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 SEPT5Q99719 369 aaPredicted RBP5.13□□□□□ -1.59
NUP88-213ENST00000576862 NAP1L4Q99733 375 aaKnown RBP5.13□□□□□ -1.59
NUP88-213ENST00000576862 PIGMQ9H3S5 423 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 CORO1CQ9ULV4 474 aaPredicted RBP5.13□□□□□ -1.59
NUP88-213ENST00000576862 KLHL20Q9Y2M5 609 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 PTPRCP08575 1304 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 ERCC6Q03468 1493 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 GAPVD1Q14C86 1478 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 WDR62O43379 1518 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 ARHGEF40Q8TER5 1519 aa5.13□□□□□ -1.59
NUP88-213ENST00000576862 TAF1P21675 1872 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 ASPDHA6ND91 283 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 KCNN4O15554 427 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 NDUFS3O75489 264 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 KCNK5O95279 499 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 RARGP13631 454 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 CDH2P19022 906 aaPredicted RBP5.12□□□□□ -1.59
NUP88-213ENST00000576862 UGT1A1P22309 533 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 ZBED6P86452 979 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 RUNX1T1Q06455 604 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 MAD2L1Q13257 205 aaPredicted RBP5.12□□□□□ -1.59
NUP88-213ENST00000576862 PNLIPRP3Q17RR3 467 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 CCDC96Q2M329 555 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 ZNF805Q5CZA5 627 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 NSUN5P2Q63ZY6 315 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 C1orf122Q6ZSJ8 110 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 ASB18Q6ZVZ8 466 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 DSG4Q86SJ6 1040 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 SLC9B2Q86UD5 537 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 TMPRSS12Q86WS5 348 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 RNF168Q8IYW5 571 aaPredicted RBP5.12□□□□□ -1.59
NUP88-213ENST00000576862 KCNH5Q8NCM2 988 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 THAP6Q8TBB0 222 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 SLC44A1Q8WWI5 657 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 QRFPRQ96P65 431 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 RRP7BPQ9NSQ0 103 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 MTMR10Q9NXD2 777 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 CWC15Q9P013 229 aaKnown RBP5.12□□□□□ -1.59
NUP88-213ENST00000576862 FBXL2Q9UKC9 423 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 DOCK7Q96N67 2140 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 VPS8Q8N3P4 1428 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 AQRO60306 1485 aaKnown RBP eCLIP5.12□□□□□ -1.59
NUP88-213ENST00000576862 ARAP1Q96P48 1450 aa5.12□□□□□ -1.59
NUP88-213ENST00000576862 PI4KAP2A4QPH2 592 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 ANKRD28O15084 1053 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 IGLV2-11P01706 119 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 ICAM1P05362 532 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 CD53P19397 219 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 PRCPP42785 496 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 TAS2R40P59535 323 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 MRPS34P82930 218 aaKnown RBP5.11□□□□□ -1.59
NUP88-213ENST00000576862 CDC16Q13042 620 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 ZNF234Q14588 700 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 SYT16Q17RD7 645 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 KRTCAP3Q53RY4 240 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 STXBP5Q5T5C0 1151 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 PAPD4Q6PIY7 484 aaKnown RBP5.11□□□□□ -1.59
NUP88-213ENST00000576862 TSPAN33Q86UF1 283 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 CIARTQ8N365 385 aaPredicted RBP5.11□□□□□ -1.59
NUP88-213ENST00000576862 NME8Q8N427 588 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 PDILTQ8N807 584 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 PPHLN1Q8NEY8 458 aaKnown RBP5.11□□□□□ -1.59
NUP88-213ENST00000576862 OR1J2Q8NGS2 313 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 USP6NLQ92738 828 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 FEM1CQ96JP0 617 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 SYT17Q9BSW7 474 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 MAGIXQ9H6Y5 334 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 IFT140Q96RY7 1462 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 ZNF608Q9ULD9 1512 aaPredicted RBP5.11□□□□□ -1.59
NUP88-213ENST00000576862 TARBP1Q13395 1621 aaKnown RBP5.11□□□□□ -1.59
NUP88-213ENST00000576862 KIF21AQ7Z4S6 1674 aa5.11□□□□□ -1.59
NUP88-213ENST00000576862 A0A1W2PP11 408 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 A8MZ25 164 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 SCAMP1O15126 338 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 DAB1O75553 588 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 OR2C1O95371 312 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 SCGB1D1O95968 90 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 CAPN3P20807 821 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 GNL1P36915 607 aaPredicted RBP5.1□□□□□ -1.59
NUP88-213ENST00000576862 RXRGP48443 463 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 GTF2H2Q13888 395 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 NAB2Q15742 525 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 KRTAP24-1Q3LI83 254 aa5.1□□□□□ -1.59
NUP88-213ENST00000576862 C9orf50Q5SZB4 431 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms