RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 JUPP14923 745 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 SPAM1P38567 509 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 ADCY8P40145 1251 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 E2F1Q01094 437 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 INSM1Q01101 510 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-216ENST00000575599 CTBSQ01459 385 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 OASLQ15646 514 aaKnown RBP13.14□□□□□ -0.31
RPAIN-216ENST00000575599 PARP6Q2NL67 630 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 PERM1Q5SV97 790 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 ZNF648Q5T619 568 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-216ENST00000575599 FAM151BQ6UXP7 276 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 RANBP10Q6VN20 620 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 CCNI2Q6ZMN8 369 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-216ENST00000575599 TMPRSS12Q86WS5 348 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 SFTPA2Q8IWL1 248 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 MAPK15Q8TD08 544 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 GPBAR1Q8TDU6 330 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 GATA6Q92908 595 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 NAT6Q93015 286 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 PLEKHG4BQ96PX9 1271 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 CARD6Q9BX69 1037 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 ABCG4Q9H172 646 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 SYNDIG1Q9H7V2 258 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 L2HGDHQ9H9P8 463 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 HOMER3Q9NSC5 361 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 TRNAU1APQ9NX07 287 aaKnown RBP13.14□□□□□ -0.31
RPAIN-216ENST00000575599 VPS18Q9P253 973 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 NFKBIL1Q9UBC1 381 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-216ENST00000575599 ZNHIT2Q9UHR6 403 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 PADI4Q9UM07 663 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 PKP3Q9Y446 797 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 PRKAB1Q9Y478 270 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 PLEKHM1Q9Y4G2 1056 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 ARL5AQ9Y689 179 aa13.14□□□□□ -0.31
RPAIN-216ENST00000575599 PLXNB3Q9ULL4 1909 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 FAM221BA6H8Z2 402 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 SLC25A14O95258 325 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-216ENST00000575599 SLU7O95391 586 aaKnown RBP13.13□□□□□ -0.31
RPAIN-216ENST00000575599 ACTN2P35609 894 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 ACTR1BP42025 376 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 ACTR1AP61163 376 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 PTPRCAPQ14761 206 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 SIX1Q15475 284 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-216ENST00000575599 PYCR3Q53H96 274 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 PDPK2PQ6A1A2 396 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 PRUNE1Q86TP1 453 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 NRROSQ86YC3 692 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 PHYKPLQ8IUZ5 450 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 CCDC89Q8N998 374 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 GLYATL1Q969I3 302 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 RTP4Q96DX8 246 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 SCARF2Q96GP6 870 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-216ENST00000575599 AP1M1Q9BXS5 423 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 OR2AG1Q9H205 316 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 SPATS2LQ9NUQ6 558 aaKnown RBP13.13□□□□□ -0.31
RPAIN-216ENST00000575599 SMARCAL1Q9NZC9 954 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 IL17CQ9P0M4 197 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 TAAR2Q9P1P5 351 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 CLCA2Q9UQC9 943 aa13.13□□□□□ -0.31
RPAIN-216ENST00000575599 PCYT1BQ9Y5K3 369 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-216ENST00000575599 GLYATL1P3A0A0U1RQE8 302 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 C2orf81A6NN90 581 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 CCDC188H7C350 402 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 STX7O15400 261 aaKnown RBP13.12□□□□□ -0.31
RPAIN-216ENST00000575599 GPR39O43194 453 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 OPA1O60313 960 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 DNAJC6O75061 913 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 MTX2O75431 263 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 STIP1P31948 543 aaKnown RBP13.12□□□□□ -0.31
RPAIN-216ENST00000575599 TARDBPQ13148 414 aaKnown RBP eCLIP13.12□□□□□ -0.31
RPAIN-216ENST00000575599 TAF1AQ15573 450 aaPredicted RBP13.12□□□□□ -0.31
RPAIN-216ENST00000575599 ATP13A5Q4VNC0 1218 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 ZDHHC20Q5W0Z9 365 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 KCTD11Q693B1 232 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 CHST15Q7LFX5 561 aaPredicted RBP13.12□□□□□ -0.31
RPAIN-216ENST00000575599 GPR156Q8NFN8 814 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 GDAP1Q8TB36 358 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 ZDHHC1Q8WTX9 485 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 CCDC74AQ96AQ1 378 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 CCDC3Q9BQI4 270 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 LRRC40Q9H9A6 602 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 IL26Q9NPH9 171 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 PIH1D1Q9NWS0 290 aaKnown RBP13.12□□□□□ -0.31
RPAIN-216ENST00000575599 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.12□□□□□ -0.31
RPAIN-216ENST00000575599 ATXN10Q9UBB4 475 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 KCTD3Q9Y597 815 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 ST14Q9Y5Y6 855 aa13.12□□□□□ -0.31
RPAIN-216ENST00000575599 ASPMQ8IZT6 3477 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 CASC3O15234 703 aaKnown RBP13.11□□□□□ -0.31
RPAIN-216ENST00000575599 NOBOXO60393 691 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 CRTAMO95727 393 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 AP2A1O95782 977 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 MT-CO3P00414 261 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 ACP5P13686 325 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 ETS1P14921 441 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 ZNF8P17098 575 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-216ENST00000575599 LPOP22079 712 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-216ENST00000575599 LMAN1P49257 510 aa13.11□□□□□ -0.31
RPAIN-216ENST00000575599 MAZP56270 477 aaKnown RBP13.11□□□□□ -0.31
RPAIN-216ENST00000575599 CHRNA6Q15825 494 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms