RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 GPR89BP0CG08 455 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 ATP1A3P13637 1013 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 ACP5P13686 325 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 CTPS1P17812 591 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 XRCC1P18887 633 aaPredicted RBP8.89□□□□□ -0.99
SMG6-218ENST00000575454 CA4P22748 312 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 MMP13P45452 471 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 STC1P52823 247 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 RPS15P62841 145 aaKnown RBP8.89□□□□□ -0.99
SMG6-218ENST00000575454 UBE2IP63279 158 aaKnown RBP8.89□□□□□ -0.99
SMG6-218ENST00000575454 PDE1BQ01064 536 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 PTSQ03393 145 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 BECN1Q14457 450 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 UGT8Q16880 541 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 HSP90AA4PQ58FG1 418 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 PPP6R3Q5H9R7 873 aaPredicted RBP8.89□□□□□ -0.99
SMG6-218ENST00000575454 ACAD10Q6JQN1 1059 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 TMCO3Q6UWJ1 677 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 TMEM26Q6ZUK4 368 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 PRSS42Q7Z5A4 293 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 SYVN1Q86TM6 617 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 TMEM135Q86UB9 458 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 TICAM1Q8IUC6 712 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 TRIM48Q8IWZ4 208 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 ATPAF2Q8N5M1 289 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 AOPEPQ8N6M6 819 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 FNIP1Q8TF40 1166 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 TGM7Q96PF1 710 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 KCTD15Q96SI1 283 aaPredicted RBP8.89□□□□□ -0.99
SMG6-218ENST00000575454 RIOK2Q9BVS4 552 aaKnown RBP8.89□□□□□ -0.99
SMG6-218ENST00000575454 BRD8Q9H0E9 1235 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 CARD9Q9H257 536 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 ACTL8Q9H568 366 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 MLXIPLQ9NP71 852 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 NLRC4Q9NPP4 1024 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 SLAMF7Q9NQ25 335 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 ACSS2Q9NR19 701 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 PCSK1NQ9UHG2 260 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 KCNK6Q9Y257 313 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 PDZD2O15018 2839 aa8.89□□□□□ -0.99
SMG6-218ENST00000575454 MTORP42345 2549 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 A0A0J9YYE9 177 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 WIPF3A6NGB9 483 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 TCP11X1B4DZS4 312 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 H3BRJ5 948 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 GRID2O43424 1007 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 NUAK1O60285 661 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 FZD6O60353 706 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 MAFKO60675 156 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 GADD45BO75293 160 aaPredicted RBP8.88□□□□□ -0.99
SMG6-218ENST00000575454 MTA2O94776 668 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 TRBC1P01850 177 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 TYRP1P17643 537 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 ELAVL4P26378 380 aaKnown RBP8.88□□□□□ -0.99
SMG6-218ENST00000575454 PTPN4P29074 926 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 SERPINB6P35237 376 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 DCTP40126 519 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 ARL4AP40617 200 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 LEPRP48357 1165 aaKnown RBP8.88□□□□□ -0.99
SMG6-218ENST00000575454 SEPHS1P49903 392 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 CCL11P51671 97 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 GFERP55789 205 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 RPL26P61254 145 aaKnown RBP8.88□□□□□ -0.99
SMG6-218ENST00000575454 SH3BP2P78314 561 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 MAMLD1Q13495 774 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 DPYSQ14117 519 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 CHRNA6Q15825 494 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 CA9Q16790 459 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 EIF2S3LQ2VIR3 472 aaKnown RBP8.88□□□□□ -0.99
SMG6-218ENST00000575454 CACHD1Q5VU97 1274 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 MCOLN2Q8IZK6 566 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 SLC34A3Q8N130 599 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 PGBD5Q8N414 524 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 PRR7Q8TB68 274 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 CCHCR1Q8TD31 782 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 CT55Q8WUE5 264 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 KLHL6Q8WZ60 621 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 ELMO2Q96JJ3 720 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 PLEKHG4BQ96PX9 1271 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 AGAP2Q99490 1192 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 AGPAT1Q99943 283 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 SNRNP25Q9BV90 132 aaKnown RBP8.88□□□□□ -0.99
SMG6-218ENST00000575454 POLR1EQ9GZS1 481 aaKnown RBP8.88□□□□□ -0.99
SMG6-218ENST00000575454 ING2Q9H160 280 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 FAM83DQ9H4H8 585 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 POT1Q9NUX5 634 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 CWC15Q9P013 229 aaKnown RBP8.88□□□□□ -0.99
SMG6-218ENST00000575454 RCOR3Q9P2K3 495 aaPredicted RBP8.88□□□□□ -0.99
SMG6-218ENST00000575454 EPHA6Q9UF33 1036 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 RARRES3Q9UL19 164 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 RPL26L1Q9UNX3 145 aaKnown RBP8.88□□□□□ -0.99
SMG6-218ENST00000575454 PRKAB1Q9Y478 270 aa8.88□□□□□ -0.99
SMG6-218ENST00000575454 ADGRG4Q8IZF6 3080 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 UNC13CQ8NB66 2214 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 SSU72P8A0A1W2PR75 194 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 DNAJB5O75953 348 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 ATP1A1P05023 1023 aaKnown RBP8.87□□□□□ -0.99
SMG6-218ENST00000575454 NELFEP18615 380 aaKnown RBP8.87□□□□□ -0.99
SMG6-218ENST00000575454 TNFAIP3P21580 790 aa8.87□□□□□ -0.99
SMG6-218ENST00000575454 LPOP22079 712 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms