RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 ZDHHC1Q8WTX9 485 aa20.5■□□□□ 0.87
HCFC1R1-208ENST00000575214 VPS35Q96QK1 796 aa20.5■□□□□ 0.87
HCFC1R1-208ENST00000575214 ETNK1Q9HBU6 452 aa20.5■□□□□ 0.87
HCFC1R1-208ENST00000575214 TRIM39Q9HCM9 518 aa20.5■□□□□ 0.87
HCFC1R1-208ENST00000575214 SPATS2LQ9NUQ6 558 aaKnown RBP20.5■□□□□ 0.87
HCFC1R1-208ENST00000575214 CLCA2Q9UQC9 943 aa20.5■□□□□ 0.87
HCFC1R1-208ENST00000575214 PCYT1BQ9Y5K3 369 aaPredicted RBP20.5■□□□□ 0.87
HCFC1R1-208ENST00000575214 ST14Q9Y5Y6 855 aa20.5■□□□□ 0.87
HCFC1R1-208ENST00000575214 E7EVH7 732 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 NUAK1O60285 661 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 MTX2O75431 263 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 MT-CO3P00414 261 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 ZNF8P17098 575 aaPredicted RBP20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 LMAN1P49257 510 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 PDE1BQ01064 536 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 CHRNA6Q15825 494 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 C14orf28Q4W4Y0 310 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 GSTA5Q7RTV2 222 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 ADGRG6Q86SQ4 1221 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 OR6C4Q8NGE1 309 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 CCDC74AQ96AQ1 378 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 PBKQ96KB5 322 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 CCDC3Q9BQI4 270 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 TMEM121BQ9BXQ6 578 aaPredicted RBP20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 SYNDIG1Q9H7V2 258 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 PAK5Q9P286 719 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 KCTD3Q9Y597 815 aa20.49■□□□□ 0.87
HCFC1R1-208ENST00000575214 PTPRBP23467 1997 aa20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 GRID2O43424 1007 aa20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 ACP5P13686 325 aa20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 TARDBPQ13148 414 aaKnown RBP eCLIP20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 MSLNQ13421 630 aaPredicted RBP20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 ITGA9Q13797 1035 aa20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 LINC00523Q86TU6 105 aa20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 GLIS1Q8NBF1 620 aa20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 DTX3LQ8TDB6 740 aa20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 RAB6BQ9NRW1 208 aa20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 HOMER3Q9NSC5 361 aa20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 PIH1D1Q9NWS0 290 aaKnown RBP20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 TMPRSS11EQ9UL52 423 aa20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 DRG1Q9Y295 367 aaKnown RBP20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 SCN8AQ9UQD0 1980 aa20.48■□□□□ 0.87
HCFC1R1-208ENST00000575214 USP27XA6NNY8 438 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 ERI2A8K979 691 aaKnown RBP20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 GPR89AB7ZAQ6 455 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 GPR39O43194 453 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 UGT1A9O60656 530 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 PRAMEF1O95521 474 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 ZSCAN5DPP0CG00 497 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 GPR89BP0CG08 455 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 TPH1P17752 444 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 UGT1A6P19224 532 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 UGT1A1P22309 533 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 UGT1A4P22310 534 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 UGT1A3P35503 534 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 UGT1A5P35504 534 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 KCNJ1P48048 391 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 MAZP56270 477 aaKnown RBP20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 TMPRSS15P98073 1019 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 SEPT6Q14141 434 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 HLTFQ14527 1009 aaKnown RBP eCLIP20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 CRTC3Q6UUV7 619 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 RASGEF1CQ8N431 466 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 OR13C4Q8NGS5 318 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 MS4A14Q96JA4 679 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 UGT1A7Q9HAW7 530 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 UGT1A10Q9HAW8 530 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 UGT1A8Q9HAW9 530 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 FKBPLQ9UIM3 349 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 KCNK6Q9Y257 313 aa20.47■□□□□ 0.87
HCFC1R1-208ENST00000575214 GAPDHSO14556 408 aaPredicted RBP20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 VEGFDO43915 354 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 CDK14O94921 469 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 ECEL1O95672 775 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 GLB1P16278 677 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 ZNF140P52738 457 aaPredicted RBP20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 BIRC2Q13490 618 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 GTF2H3Q13889 308 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 POU6F1Q14863 301 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 KHDC1Q4VXA5 237 aaKnown RBP20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 CERCAMQ5T4B2 595 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 PPP1R21Q6ZMI0 780 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 DCBLD1Q8N8Z6 715 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 PRELID2Q8N945 189 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 DNAAF3Q8N9W5 541 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 OR52K1Q8NGK4 314 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 TTC25Q96NG3 672 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 DEPDC7Q96QD5 511 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 RABGEF1Q9UJ41 708 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 APPL1Q9UKG1 709 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 PYCARDQ9ULZ3 195 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 RPL22P35268 128 aaKnown RBP20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 HADHAP40939 763 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 CDH17Q12864 832 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 TMEM115Q12893 351 aaPredicted RBP20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 SEMA5AQ13591 1074 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 PLA2G4EQ3MJ16 856 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 LDLRAP1Q5SW96 308 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 CDCP2Q5VXM1 449 aa20.46■□□□□ 0.87
HCFC1R1-208ENST00000575214 LRRTM4Q86VH4 590 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms