RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 TBC1D15Q8TC07 691 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 BIRC7Q96CA5 298 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 ATOH8Q96SQ7 321 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 BEGAINQ9BUH8 593 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 POLR1EQ9GZS1 481 aaKnown RBP10.69□□□□□ -0.7
CCDC40-207ENST00000572253 TUBB1Q9H4B7 451 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 ST3GAL5Q9UNP4 418 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 TIMM22Q9Y584 194 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 FNDC1Q4ZHG4 1894 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-207ENST00000572253 FAM234BA2RU67 622 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 LDB2O43679 373 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 NDUFS3O75489 264 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 UROSP10746 265 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 CDH1P12830 882 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 TBX4P57082 545 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 BNIP3Q12983 259 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 EIF4EBP2Q13542 120 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-207ENST00000572253 TUBA3CQ13748 450 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 PDCD4Q53EL6 469 aaKnown RBP10.69□□□□□ -0.7
CCDC40-207ENST00000572253 FGD3Q5JSP0 725 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 MSANTD2Q6P1R3 559 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 XKR5Q6UX68 686 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 ATP6V0D2Q8N8Y2 350 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 ZBTB8BQ8NAP8 495 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-207ENST00000572253 CCDC138Q96M89 665 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 TMEM209Q96SK2 561 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 SEMA3CQ99985 751 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 RTP3Q9BQQ7 232 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 LRRC3Q9BY71 257 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 DERL2Q9GZP9 239 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 ADNPQ9H2P0 1102 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 POLR3BQ9NW08 1133 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-207ENST00000572253 MIOSQ9NXC5 875 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 ZIM2Q9NZV7 527 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 GNPTGQ9UJJ9 305 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 OAS3Q9Y6K5 1087 aaKnown RBP10.69□□□□□ -0.7
CCDC40-207ENST00000572253 TCRBV5S2A0A599 114 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 ENO2P09104 434 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-207ENST00000572253 BRCC3P46736 316 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 CD97P48960 835 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 SUOXP51687 545 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 ERVK-8P63133 956 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 MRPS6P82932 125 aaKnown RBP10.69□□□□□ -0.7
CCDC40-207ENST00000572253 PRKG2Q13237 762 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 UPP1Q16831 310 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 PRAMEF19Q5SWL8 479 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 ZNF549Q6P9A3 640 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 RAB2BQ8WUD1 216 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 SLC30A3Q99726 388 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 HGH1Q9BTY7 390 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 TRIM8Q9BZR9 551 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 FANCEQ9HB96 536 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 HPS4Q9NQG7 708 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 TMLHEQ9NVH6 421 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 COMMD8Q9NX08 183 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 COQ6Q9Y2Z9 468 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 TRPV2Q9Y5S1 764 aa10.69□□□□□ -0.7
CCDC40-207ENST00000572253 A0A1W2PQH9 124 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 TBC1D4O60343 1298 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 SYNCRIPO60506 623 aaKnown RBP10.68□□□□□ -0.7
CCDC40-207ENST00000572253 MT-ND1P03886 318 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 MTHFD2P13995 350 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 PAX3P23760 479 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 GJA5P36382 358 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 MAGEA8P43361 318 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 YAP1P46937 504 aaKnown RBP10.68□□□□□ -0.7
CCDC40-207ENST00000572253 CTBSQ01459 385 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 DAG1Q14118 895 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 ATP6AP1LQ52LC2 224 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 TTC23Q5W5X9 447 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 FAM219BQ5XKK7 198 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 GLYATQ6IB77 296 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 ELMSAN1Q6PJG2 1045 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 PRR23BQ6ZRT6 265 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 HID1Q8IV36 788 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 NKAPQ8N5F7 415 aaKnown RBP10.68□□□□□ -0.7
CCDC40-207ENST00000572253 ITFG1Q8TB96 612 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 GIPC2Q8TF65 315 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 RSPH1Q8WYR4 309 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 PSMG2Q969U7 264 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 ZNF599Q96NL3 588 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 PIF1Q9H611 641 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 NOL6Q9H6R4 1146 aaKnown RBP10.68□□□□□ -0.7
CCDC40-207ENST00000572253 TMEM45AQ9NWC5 275 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 TMEM248Q9NWD8 314 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 WARS2Q9UGM6 360 aaKnown RBP10.68□□□□□ -0.7
CCDC40-207ENST00000572253 TLR6Q9Y2C9 796 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 CCL15-CCL14A0A0B4J2E2 113 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 CFAP99D6REC4 459 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 HAS3O00219 553 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 GSTA4O15217 222 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 FOXD2O60548 495 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-207ENST00000572253 RAMP2O60895 175 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 PEX11BO96011 259 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 CYP11A1P05108 521 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 THRBP10828 461 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 STC1P52823 247 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 UFM1P61960 85 aa10.68□□□□□ -0.7
CCDC40-207ENST00000572253 ADARB1P78563 741 aaKnown RBP10.68□□□□□ -0.7
CCDC40-207ENST00000572253 CACNB2Q08289 660 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms