RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 NFKB2Q00653 900 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 ZRANB3Q5FWF4 1079 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 METTL21CQ5VZV1 264 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 PSAPL1Q6NUJ1 521 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 CERS6Q6ZMG9 384 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 PACS2Q86VP3 889 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 PIANPQ8IYJ0 282 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 LSMEM2Q8N112 164 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 OR6K2Q8NGY2 324 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 RHEBL1Q8TAI7 183 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 SGF29Q96ES7 293 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 LYSMD1Q96S90 227 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 TFB2MQ9H5Q4 396 aaKnown RBP17.21■□□□□ 0.35
RPAIN-208ENST00000571043 ZFYVE1Q9HBF4 777 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 BPIFA1Q9NP55 256 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 DEC1Q9P2X7 70 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 PPIL1Q9Y3C6 166 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 OAS3Q9Y6K5 1087 aaKnown RBP17.21■□□□□ 0.35
RPAIN-208ENST00000571043 SLC30A1Q9Y6M5 507 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 KIAA1549LQ6ZVL6 1849 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 COL4A3Q01955 1670 aa17.21■□□□□ 0.35
RPAIN-208ENST00000571043 A0A1W2PQ67 120 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 CCDC189A1A4V9 331 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 TRIM24O15164 1050 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 HDAC3O15379 428 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 ALPIP09923 528 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 ESRRAP11474 423 aaPredicted RBP17.21■□□□□ 0.34
RPAIN-208ENST00000571043 AOC1P19801 751 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 MPSTP25325 297 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 PPARGP37231 505 aaPredicted RBP17.21■□□□□ 0.34
RPAIN-208ENST00000571043 DGKGP49619 791 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 STK19P49842 368 aaPredicted RBP17.21■□□□□ 0.34
RPAIN-208ENST00000571043 ATP6V0D1P61421 351 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 GALNT1Q10472 559 aaPredicted RBP17.21■□□□□ 0.34
RPAIN-208ENST00000571043 RIPK1Q13546 671 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 PTPRRQ15256 657 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 CDKN3Q16667 212 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 PTPRNQ16849 979 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 CARD16Q5EG05 197 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 PLPP6Q8IY26 295 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 KIRREL3Q8IZU9 778 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 RYBPQ8N488 228 aaPredicted RBP17.21■□□□□ 0.34
RPAIN-208ENST00000571043 CCNYL1Q8N7R7 359 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 EID2BQ96D98 161 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 ECHDC3Q96DC8 303 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 RPL10LQ96L21 214 aaKnown RBP17.21■□□□□ 0.34
RPAIN-208ENST00000571043 BIRC8Q96P09 236 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 DERL2Q9GZP9 239 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 ALG9Q9H6U8 611 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 ARMCX1Q9P291 453 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 HECAQ9UBI9 543 aaPredicted RBP17.21■□□□□ 0.34
RPAIN-208ENST00000571043 MED16Q9Y2X0 877 aa17.21■□□□□ 0.34
RPAIN-208ENST00000571043 VCANP13611 3396 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 ATG2BQ96BY7 2078 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 DIAPH2O60879 1101 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 VPS26AO75436 327 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 POP4O95707 220 aaKnown RBP17.2■□□□□ 0.34
RPAIN-208ENST00000571043 ESR1P03372 595 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 TPBGLP0DKB5 382 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 GLULP15104 373 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 HNF1BP35680 557 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 CDKN1CP49918 316 aaPredicted RBP17.2■□□□□ 0.34
RPAIN-208ENST00000571043 PTPN5P54829 565 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 ALDH18A1P54886 795 aaKnown RBP17.2■□□□□ 0.34
RPAIN-208ENST00000571043 ECT2LQ008S8 904 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 RAD51Q06609 339 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 SEL1L3Q68CR1 1132 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 PARP9Q8IXQ6 854 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 CBARPQ8N350 705 aaPredicted RBP17.2■□□□□ 0.34
RPAIN-208ENST00000571043 PHTF2Q8N3S3 785 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 NKAPQ8N5F7 415 aaKnown RBP17.2■□□□□ 0.34
RPAIN-208ENST00000571043 VOPP1Q96AW1 172 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 ZNF641Q96N77 438 aaPredicted RBP17.2■□□□□ 0.34
RPAIN-208ENST00000571043 BTBD10Q9BSF8 475 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 TRMOQ9BU70 441 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 TBC1D10AQ9BXI6 508 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 SUV39H2Q9H5I1 410 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 EML4Q9HC35 981 aaKnown RBP17.2■□□□□ 0.34
RPAIN-208ENST00000571043 TAGLN3Q9UI15 199 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 APPL1Q9UKG1 709 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 DUSP12Q9UNI6 340 aa17.2■□□□□ 0.34
RPAIN-208ENST00000571043 C1orf232A0A0U1RR37 186 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 NEMP2A6NFY4 417 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 ZBTB14O43829 449 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 SMIM24O75264 130 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 IMPDH1P20839 514 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 GKP32189 559 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 SETMARQ53H47 684 aaPredicted RBP17.19■□□□□ 0.34
RPAIN-208ENST00000571043 LYPLAL1Q5VWZ2 237 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 ADIPOR2Q86V24 386 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 RALGPS2Q86X27 583 aaPredicted RBP17.19■□□□□ 0.34
RPAIN-208ENST00000571043 TREML1Q86YW5 311 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 AHI1Q8N157 1196 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 PAF1Q8N7H5 531 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 GRIN3AQ8TCU5 1115 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 KCNJ9Q92806 393 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 UTP4Q969X6 686 aaKnown RBP17.19■□□□□ 0.34
RPAIN-208ENST00000571043 KIAA1191Q96A73 305 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 PTERQ96BW5 349 aa17.19■□□□□ 0.34
RPAIN-208ENST00000571043 L3HYPDHQ96EM0 354 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms