RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 K7ENP7 123 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 ASMTLO95671 621 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 ATP1A1P05023 1023 aaKnown RBP16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 ALDH4A1P30038 563 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 CTNNA1P35221 906 aaKnown RBP16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 PTPN7P35236 360 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 VAC14Q08AM6 782 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 ZNF569Q5MCW4 686 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 CCDC70Q6NSX1 233 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 INO80CQ6PI98 192 aaPredicted RBP16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 FOXR1Q6PIV2 292 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 KDELC1Q6UW63 502 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 BBS12Q6ZW61 710 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 TMTC1Q8IUR5 882 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 SPATA22Q8NHS9 363 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 SLC37A2Q8TED4 501 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 GLYATL1Q969I3 302 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 NAF1Q96HR8 494 aaKnown RBP16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 QKIQ96PU8 341 aaKnown RBP eCLIP16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 FCRL5Q96RD9 977 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 NUDT22Q9BRQ3 303 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 SEMA6CQ9H3T2 930 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 TRIM39Q9HCM9 518 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 SAE1Q9UBE0 346 aaPredicted RBP16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 ZNHIT2Q9UHR6 403 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 TRHDEQ9UKU6 1024 aa16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 EPN1Q9Y6I3 576 aaPredicted RBP16.91■□□□□ 0.3
MAP1LC3B-208ENST00000570189 SDK2Q58EX2 2172 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 KIR2DS5A0A0G2JLQ3 304 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 A0A0G2JNG1 304 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 APOC4-APOC2K7ER74 178 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 KIR2DS3K7RE56 304 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 GRID2O43424 1007 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 NDUFA10O95299 355 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 APOC2P02655 101 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 THRAP10827 490 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 LIPCP11150 499 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 F3P13726 295 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 ZNF75DP51815 510 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 EPHA4P54764 986 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 KIR2DS5Q14953 304 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 C16orf72Q14CZ0 275 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 ZDHHC20Q5W0Z9 365 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 IYDQ6PHW0 289 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 MARK2Q7KZI7 788 aaKnown RBP16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 HTR3CQ8WXA8 447 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 SH3KBP1Q96B97 665 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 SPATA16Q9BXB7 569 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 GPR63Q9BZJ6 419 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 GOLPH3Q9H4A6 298 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 RDH14Q9HBH5 336 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 CPNE5Q9HCH3 593 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.9■□□□□ 0.32e-7■■□□□ 13.7
MAP1LC3B-208ENST00000570189 HACD3Q9P035 362 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 AKAP7Q9P0M2 348 aaPredicted RBP16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 ATXN10Q9UBB4 475 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 PISDQ9UG56 409 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 PCDHGA3Q9Y5H0 932 aa16.9■□□□□ 0.3
MAP1LC3B-208ENST00000570189 COL6A6A6NMZ7 2263 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TNNT1P13805 278 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 HGFP14210 728 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 BPIP17213 487 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 NFKB1P19838 968 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CSF2RBP32927 897 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 MARCKSL1P49006 195 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CFHR1Q03591 330 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 MPP3Q13368 585 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 BIRC2Q13490 618 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PCSK7Q16549 785 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TMEM71Q6P5X7 295 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 WDR74Q6RFH5 385 aaPredicted RBP16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PCSK4Q6UW60 755 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CHST15Q7LFX5 561 aaPredicted RBP16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ADGRG6Q86SQ4 1221 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 DAAM2Q86T65 1068 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 DTX1Q86Y01 620 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PHYKPLQ8IUZ5 450 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ZNF567Q8N184 647 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 SLC39A7Q92504 469 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 MRGPRX2Q96LB1 330 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 CCNL2Q96S94 520 aaPredicted RBP16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 EPB41L1Q9H4G0 881 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 UCK1Q9HA47 277 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 KCNK4Q9NYG8 393 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TBC1D29Q9UFV1 150 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 SHOC2Q9UQ13 582 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PCDHA3Q9Y5H8 950 aa16.89■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PJA2O43164 708 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 VEGFDO43915 354 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PPFIA2O75334 1257 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PMPCBO75439 489 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ZNF189O75820 626 aaPredicted RBP16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 SLC25A14O95258 325 aaPredicted RBP16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 EML2O95834 649 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PIRTP0C851 137 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ZNF8P17098 575 aaPredicted RBP16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ITIH1P19827 911 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 HLA-DPA1P20036 260 aa16.88■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ETV5P41161 510 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms