RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 FUBP1Q96AE4 644 aaKnown RBP11.91□□□□□ -0.5
FANCA-231ENST00000568626 COX14Q96I36 57 aa11.91□□□□□ -0.5
FANCA-231ENST00000568626 BMFQ96LC9 184 aa11.91□□□□□ -0.5
FANCA-231ENST00000568626 C9orf72Q96LT7 481 aa11.91□□□□□ -0.5
FANCA-231ENST00000568626 WDR92Q96MX6 357 aa11.91□□□□□ -0.5
FANCA-231ENST00000568626 FCRL3Q96P31 734 aaPredicted RBP11.91□□□□□ -0.5
FANCA-231ENST00000568626 TCF12Q99081 682 aa11.91□□□□□ -0.5
FANCA-231ENST00000568626 APOOQ9BUR5 198 aa11.91□□□□□ -0.5
FANCA-231ENST00000568626 CDC42EP4Q9H3Q1 356 aaKnown RBP11.91□□□□□ -0.5
FANCA-231ENST00000568626 SUDS3Q9H7L9 328 aaPredicted RBP11.91□□□□□ -0.5
FANCA-231ENST00000568626 C20orf96Q9NUD7 363 aaPredicted RBP11.91□□□□□ -0.5
FANCA-231ENST00000568626 NSMCE4AQ9NXX6 385 aa11.91□□□□□ -0.5
FANCA-231ENST00000568626 VPS18Q9P253 973 aa11.91□□□□□ -0.5
FANCA-231ENST00000568626 GMEB2Q9UKD1 530 aa11.91□□□□□ -0.5
FANCA-231ENST00000568626 ATXN2Q99700 1313 aaKnown RBP11.9□□□□□ -0.5
FANCA-231ENST00000568626 DOCK9Q9BZ29 2069 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 FAM186AA6NE01 2351 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 F8W8V4 182 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 H0Y8X5 98 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 TLR4O00206 839 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 TNFRSF10CO14798 259 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 CD3EAPO15446 510 aaKnown RBP11.9□□□□□ -0.5
FANCA-231ENST00000568626 SLC25A14O95258 325 aaPredicted RBP11.9□□□□□ -0.5
FANCA-231ENST00000568626 RETP07949 1114 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 MYBL2P10244 700 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 ACRV1P26436 265 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 ARNTP27540 789 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 MPLP40238 635 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 C21orf59P57076 290 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 MGAT5Q09328 741 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 ILF2Q12905 390 aaKnown RBP11.9□□□□□ -0.5
FANCA-231ENST00000568626 GTF2H3Q13889 308 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 PDE1CQ14123 709 aaPredicted RBP11.9□□□□□ -0.5
FANCA-231ENST00000568626 DUOXA1Q1HG43 343 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 GPRC6AQ5T6X5 926 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 RIF1Q5UIP0 2472 aaKnown RBP11.9□□□□□ -0.5
FANCA-231ENST00000568626 ZNF470Q6ECI4 717 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 Q6ZSR6 202 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 KIAA0408Q6ZU52 694 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 SDCCAG8Q86SQ7 713 aaPredicted RBP11.9□□□□□ -0.5
FANCA-231ENST00000568626 CNTN4Q8IWV2 1026 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 GSPT2Q8IYD1 628 aaKnown RBP11.9□□□□□ -0.5
FANCA-231ENST00000568626 PELI3Q8N2H9 469 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 OXR1Q8N573 874 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 MYRIPQ8NFW9 859 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 OR13H1Q8NG92 308 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 GDAP1Q8TB36 358 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 COPS8Q99627 209 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 TRIM56Q9BRZ2 755 aaKnown RBP11.9□□□□□ -0.5
FANCA-231ENST00000568626 PARD6BQ9BYG5 372 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 RMI1Q9H9A7 625 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 ZDHHC3Q9NYG2 299 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 NINJ2Q9NZG7 142 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 CA5BQ9Y2D0 317 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 OR1A2Q9Y585 309 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.9□□□□□ -0.5
FANCA-231ENST00000568626 VPS13AQ96RL7 3174 aa11.9□□□□□ -0.5
FANCA-231ENST00000568626 IGLV3-16A0A075B6K0 115 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 SPTY2D1-AS1A0A0U1RR47 76 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 TCRBV9S1A1TA0A576 114 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 OR51F1A6NGY5 319 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 QSOX1O00391 747 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 INPP4BO15327 924 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 CTIFO43310 598 aaKnown RBP11.89□□□□□ -0.51
FANCA-231ENST00000568626 VEGFDO43915 354 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 LRP3O75074 770 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 ERLIN1O75477 346 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 ABHD2P08910 425 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 PMLP29590 882 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 SSTR1P30872 391 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 AKT1P31749 480 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 BLKP51451 505 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 PMS2P54278 862 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 NXPH1P58417 271 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 NAB1Q13506 487 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 LPAL2Q16609 132 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 TYSND1Q2T9J0 566 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 HSP90AA5PQ58FG0 334 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 PSAPL1Q6NUJ1 521 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 PACS1Q6VY07 963 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 C3orf62Q6ZUJ4 267 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 TAS2R42Q7RTR8 314 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 GALNT7Q86SF2 657 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 PARGQ86W56 976 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 SERPINA9Q86WD7 417 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 CILP2Q8IUL8 1156 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 RBFAQ8N0V3 343 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 SLC22A18ASQ8N1D0 253 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 SUMF1Q8NBK3 374 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 AENQ8WTP8 325 aaKnown RBP11.89□□□□□ -0.51
FANCA-231ENST00000568626 DCUN1D1Q96GG9 259 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 ZNF514Q96K75 400 aaPredicted RBP11.89□□□□□ -0.51
FANCA-231ENST00000568626 FUT8Q9BYC5 575 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 TXLNGYQ9BZA5 131 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 ZDHHC5Q9C0B5 715 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 VPS37BQ9H9H4 285 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 ERVMER34-1Q9H9K5 563 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 PLAC1Q9HBJ0 212 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 LRRC4CQ9HCJ2 640 aa11.89□□□□□ -0.51
FANCA-231ENST00000568626 TRIM39Q9HCM9 518 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms