RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 PRLP01236 227 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 FGF3P11487 239 aaPredicted RBP18.42■□□□□ 0.54
LINC01238-205ENST00000567549 SLC1A1P43005 524 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 CLCNKAP51800 687 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 GBE1Q04446 702 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 MESDQ14696 234 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 QPCTQ16769 361 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 ATP13A4Q4VNC1 1196 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 LRRC38Q5VT99 294 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 NKAIN2Q5VXU1 208 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 ZDHHC20Q5W0Z9 365 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 IYDQ6PHW0 289 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 PRICKLE2Q7Z3G6 844 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 VASH2Q86V25 355 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 CACNA2D3Q8IZS8 1091 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 EXTL1Q92935 676 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 CCDC42Q96M95 316 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 SEMA4CQ9C0C4 833 aa18.42■□□□□ 0.54
LINC01238-205ENST00000567549 NFKBIL1Q9UBC1 381 aaPredicted RBP18.42■□□□□ 0.54
LINC01238-205ENST00000567549 LILRA5A6NI73 299 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 EFCAB7A8K855 629 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 ZNF891A8MT65 544 aaPredicted RBP18.41■□□□□ 0.54
LINC01238-205ENST00000567549 KCNK1O00180 336 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 MTSS1O43312 755 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 NUAK1O60285 661 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 ATP1A1P05023 1023 aaKnown RBP18.41■□□□□ 0.54
LINC01238-205ENST00000567549 ACP5P13686 325 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 MAP4P27816 1152 aaKnown RBP18.41■□□□□ 0.54
LINC01238-205ENST00000567549 MC1RQ01726 317 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 KCNC4Q03721 635 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 NIPAL4Q0D2K0 466 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 NFATC3Q12968 1075 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 PTPRRQ15256 657 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 TRIM48Q8IWZ4 208 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 TRAM1L1Q8N609 369 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 PQLC3Q8N755 202 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 PTCD2Q8WV60 388 aaKnown RBP18.41■□□□□ 0.54
LINC01238-205ENST00000567549 NCSTNQ92542 709 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 NKD1Q969G9 470 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 AGAP2Q99490 1192 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 DNAJC7Q99615 494 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 GPR63Q9BZJ6 419 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 SLC25A51Q9H1U9 297 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 CLMPQ9H6B4 373 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 UCK1Q9HA47 277 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 TRIM39Q9HCM9 518 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.41■□□□□ 0.54
LINC01238-205ENST00000567549 NENFQ9UMX5 172 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 ST14Q9Y5Y6 855 aa18.41■□□□□ 0.54
LINC01238-205ENST00000567549 VEGFDO43915 354 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 SNX2O60749 519 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 CSF2RBP32927 897 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 UGT1A3P35503 534 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 NR2C2P49116 596 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 TAS2R40P59535 323 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 CDK18Q07002 472 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 NFATC2Q13469 925 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 TFDP2Q14188 446 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 INSCQ1MX18 579 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 SLC9A4Q6AI14 798 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 BORAQ6PGQ7 559 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 ATG14Q6ZNE5 492 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 RFLNAQ6ZTI6 216 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 RHOT1Q8IXI2 618 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 RBM12BQ8IXT5 1001 aaKnown RBP18.4■□□□□ 0.54
LINC01238-205ENST00000567549 NLGN4XQ8N0W4 816 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 NLGN4YQ8NFZ3 816 aaPredicted RBP18.4■□□□□ 0.54
LINC01238-205ENST00000567549 SLC35G2Q8TBE7 412 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 RBSNQ9H1K0 784 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 OSGEPL1Q9H4B0 414 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 FBXO8Q9NRD0 319 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 KCNK6Q9Y257 313 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 PLEKHM1Q9Y4G2 1056 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 B3GALT1Q9Y5Z6 326 aa18.4■□□□□ 0.54
LINC01238-205ENST00000567549 TRBV23OR9-2A0A075B6M9 112 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 KMOO15229 486 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 TOX3O15405 576 aaPredicted RBP18.39■□□□□ 0.53
LINC01238-205ENST00000567549 RAD1O60671 282 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 KRT1P04264 644 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 MC2RQ01718 297 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 GTF2H3Q13889 308 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 RFX6Q8HWS3 928 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 RAPGEF5Q92565 580 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 ANP32BQ92688 251 aaKnown RBP18.39■□□□□ 0.53
LINC01238-205ENST00000567549 IMP4Q96G21 291 aaKnown RBP18.39■□□□□ 0.53
LINC01238-205ENST00000567549 TTC25Q96NG3 672 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 FERMT1Q9BQL6 677 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 ZCCHC2Q9C0B9 1178 aaKnown RBP18.39■□□□□ 0.53
LINC01238-205ENST00000567549 TRABDQ9H4I3 376 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 STARD5Q9NSY2 213 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 GEMIN8Q9NWZ8 242 aaKnown RBP18.39■□□□□ 0.53
LINC01238-205ENST00000567549 CPNE7Q9UBL6 633 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 TBC1D29Q9UFV1 150 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 TUBD1Q9UJT1 453 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 SDK2Q58EX2 2172 aa18.39■□□□□ 0.53
LINC01238-205ENST00000567549 A0A0A6YYK5 440 aaPredicted RBP18.38■□□□□ 0.53
LINC01238-205ENST00000567549 A0A0U1RQS6 177 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 FADS2P1A8MWK0 482 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 KCNJ13O60928 360 aa18.38■□□□□ 0.53
LINC01238-205ENST00000567549 VIPP01282 170 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms