RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 ABCG4Q9H172 646 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 SUDS3Q9H7L9 328 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 RMI1Q9H9A7 625 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 SIRPGQ9P1W8 387 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 FEZ2Q9UHY8 353 aaPredicted RBP13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 PADI4Q9UM07 663 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 GPSM3Q9Y4H4 160 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 KCTD3Q9Y597 815 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 ARL5AQ9Y689 179 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 SAR1BQ9Y6B6 198 aa13.71□□□□□ -0.21
HERPUD1-210ENST00000565966 KIF26BQ2KJY2 2108 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 GOLGA6L10A0A0M3HER8 536 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 FAM149AA5PLN7 773 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 E7EVH7 732 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 PPFIA2O75334 1257 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 SLC25A14O95258 325 aaPredicted RBP13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 TPH1P17752 444 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 LPOP22079 712 aaPredicted RBP13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 ADCY8P40145 1251 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 ETF1P62495 437 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 CTBSQ01459 385 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 PTPRCAPQ14761 206 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 HES3Q5TGS1 186 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 CCDC137Q6PK04 289 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 UNQ6494/PRO21346Q6UXR6 183 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 MARK2Q7KZI7 788 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 LINC00523Q86TU6 105 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 NRROSQ86YC3 692 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 GALNT13Q8IUC8 556 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 GPR156Q8NFN8 814 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 OR52K1Q8NGK4 314 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 BRSK1Q8TDC3 778 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 CAPZA3Q96KX2 299 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 OR2M4Q96R27 311 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 DPEP2Q9H4A9 486 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 TRIM39Q9HCM9 518 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 IL26Q9NPH9 171 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 PIH1D1Q9NWS0 290 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 PKP3Q9Y446 797 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 OAS3Q9Y6K5 1087 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 PIKFYVEQ9Y2I7 2098 aa13.7□□□□□ -0.22
HERPUD1-210ENST00000565966 C2orf81A6NN90 581 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 C1QTNF9BB2RNN3 333 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 STX7O15400 261 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 NUAK1O60285 661 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 OPA1O60313 960 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 DNAJC6O75061 913 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 CRTAMO95727 393 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 KRT14P02533 472 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 APRTP07741 180 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 C1QTNF9P0C862 333 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 AK4P27144 223 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 SPAM1P38567 509 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 GRIA1P42261 906 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 LMAN1P49257 510 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 FNTAP49354 379 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 BASP1P80723 227 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 LRP8Q14114 963 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 TRIP13Q15645 432 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 PERM1Q5SV97 790 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 KYQ8NBH2 561 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 MAPK15Q8TD08 544 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 GLYATL1Q969I3 302 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 VPS35Q96QK1 796 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 EIF2B3Q9NR50 452 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 SPATS2LQ9NUQ6 558 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 TAAR2Q9P1P5 351 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 ZNHIT2Q9UHR6 403 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 CLCA2Q9UQC9 943 aa13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 COL27A1Q8IZC6 1860 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-210ENST00000565966 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 B4DGG1 531 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 GPR89AB7ZAQ6 455 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 GAPDHSO14556 408 aaPredicted RBP13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 LDB2O43679 373 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 NOBOXO60393 691 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 MT-CO3P00414 261 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 PROS1P07225 676 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 GPR89BP0CG08 455 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 CASQ1P31415 396 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 ACTR1BP42025 376 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 VPS41P49754 854 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 ZNF140P52738 457 aaPredicted RBP13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 CLDN6P56747 220 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 ACTR1AP61163 376 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 PDE1BQ01064 536 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 CDH17Q12864 832 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 TARDBPQ13148 414 aaKnown RBP eCLIP13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 CAMK2BQ13554 666 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 POU6F1Q14863 301 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 CDCP2Q5VXM1 449 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 SLC30A9Q6PML9 568 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 FAM151BQ6UXP7 276 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 SYT10Q6XYQ8 523 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 PPP1R21Q6ZMI0 780 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 MARCH9Q86YJ5 346 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 PHYKPLQ8IUZ5 450 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 DNAAF3Q8N9W5 541 aa13.68□□□□□ -0.22
HERPUD1-210ENST00000565966 OR4K2Q8NGD2 314 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms