RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CTSEP14091 401 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 YBX3P16989 372 aaKnown RBP eCLIP5.07□□□□□ -1.62e-6■■■□□ 18.7
SMG1-211ENST00000565324 AGTR1P30556 359 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 ATXN1P54253 815 aaKnown RBP5.07□□□□□ -1.6
SMG1-211ENST00000565324 HMGCS2P54868 508 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 TPTEP56180 551 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 RPL38P63173 70 aaKnown RBP5.07□□□□□ -1.6
SMG1-211ENST00000565324 GNA12Q03113 381 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 RAPSNQ13702 412 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 ZNF709Q8N972 641 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 COPS4Q9BT78 406 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 ZFP14Q9HCL3 533 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 SLC39A1Q9NY26 324 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 PDP1Q9P0J1 537 aaPredicted RBP5.07□□□□□ -1.6
SMG1-211ENST00000565324 RBMX2Q9Y388 322 aaKnown RBP5.07□□□□□ -1.6
SMG1-211ENST00000565324 PCDHB12Q9Y5F1 795 aa5.07□□□□□ -1.6
SMG1-211ENST00000565324 MADDQ8WXG6 1647 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 CYP1A2P05177 515 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 IFI30P13284 250 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CD247P20963 164 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 GNALP38405 381 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PSEN1P49768 467 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 IQSEC1Q6DN90 963 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 BORAQ6PGQ7 559 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 RIOX2Q8IUF8 465 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 TRAPPC5Q8IUR0 188 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 GLB1L3Q8NCI6 653 aaPredicted RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 TDRD3Q9H7E2 651 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 TM9SF3Q9HD45 589 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 SNX15Q9NRS6 342 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 MAFFQ9ULX9 164 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CLTCL1P53675 1640 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 FRMPD4Q14CM0 1322 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 SLC12A8A0AV02 714 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 IFNA2P01563 188 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 C8BP07358 591 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CDC25CP30307 473 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 HOXC12P31275 282 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 HTR7P34969 479 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CNPY1Q3B7I2 92 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 SUSD4Q5VX71 490 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PHC2Q8IXK0 858 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ASB15Q8WXK1 588 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 C12orf43Q96C57 262 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 HSPA12BQ96MM6 686 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ZNF69Q9UC07 566 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PTBP2Q9UKA9 531 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 ENTPD6O75354 484 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 SUPT20HL2P0C7V6 817 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CLUP10909 449 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CCNB1P14635 433 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 TUFMP49411 452 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 MPP1Q00013 466 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 FAM91A1Q658Y4 838 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 AHSA2Q719I0 299 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 KAT8Q9H7Z6 458 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 PRDM4Q9UKN5 801 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 DPPA5A6NC42 116 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 USP12O75317 370 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 AKAP3O75969 853 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CYP17A1P05093 508 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 IGKV5-2P06315 115 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 LHCGRP22888 699 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 MLLT6P55198 1093 aaPredicted RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 GNG2P59768 71 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 GRB10Q13322 594 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 FIP1L1Q6UN15 594 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 C17orf64Q86WR6 236 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 SEPT12Q8IYM1 358 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 LINC00471Q8N535 108 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CHST4Q8NCG5 386 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 TOR1AIP2Q8NFQ8 470 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PSKH2Q96QS6 385 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 EBNA1BP2Q99848 306 aaKnown RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 ZYG11BQ9C0D3 744 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 FAM124BQ9H5Z6 455 aaPredicted RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 POLR3BQ9NW08 1133 aaPredicted RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 ARL5CA6NH57 179 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 DCDC2CA8MYV0 355 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 POMCP01189 267 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CALCAP01258 141 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 CSN2P05814 226 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 LCN1P31025 176 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PRKCIP41743 596 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 FAPQ12884 760 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 LAPTM5Q13571 262 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 GALNT5Q7Z7M9 940 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 DENND1CQ8IV53 801 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ANKFN1Q8N957 763 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 SPATA20Q8TB22 786 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 DPF3Q92784 378 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 FAM84BQ96KN1 310 aaPredicted RBP5.06□□□□□ -1.6
SMG1-211ENST00000565324 HIPK3Q9H422 1215 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ASB8Q9H765 288 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 DNAJC18Q9H819 358 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 ABCD2Q9UBJ2 740 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 IKZF2Q9UKS7 526 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 NR2E1Q9Y466 385 aa5.06□□□□□ -1.6
SMG1-211ENST00000565324 PCDHB5Q9Y5E4 795 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms