RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 DEPDC7Q96QD5 511 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 TBL1YQ9BQ87 522 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 RMI1Q9H9A7 625 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 TRIM39Q9HCM9 518 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 ARL5AQ9Y689 179 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 RNF215Q9Y6U7 377 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 CACNA1BQ00975 2339 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 APC2O95996 2303 aa28■■■□□ 2.07
NME3-203ENST00000563367 ACACAQ13085 2346 aa28■■■□□ 2.07
NME3-203ENST00000563367 NUAK1O60285 661 aa28■■■□□ 2.07
NME3-203ENST00000563367 GLB1P16278 677 aa28■■■□□ 2.07
NME3-203ENST00000563367 MAZP56270 477 aaKnown RBP28■■■□□ 2.07
NME3-203ENST00000563367 ATP13A5Q4VNC0 1218 aa28■■■□□ 2.07
NME3-203ENST00000563367 KHDC1Q4VXA5 237 aaKnown RBP28■■■□□ 2.07
NME3-203ENST00000563367 OR6C4Q8NGE1 309 aa28■■■□□ 2.07
NME3-203ENST00000563367 RTP4Q96DX8 246 aa28■■■□□ 2.07
NME3-203ENST00000563367 GAPDHSO14556 408 aaPredicted RBP27.99■■■□□ 2.07
NME3-203ENST00000563367 MTX2O75431 263 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 ECEL1O95672 775 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 CA5AP35218 305 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 CCL7P80098 99 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 SNX1Q13596 522 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 SIX1Q15475 284 aaPredicted RBP27.99■■■□□ 2.07
NME3-203ENST00000563367 CHRNA6Q15825 494 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 FAM151BQ6UXP7 276 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 CHST15Q7LFX5 561 aaPredicted RBP27.99■■■□□ 2.07
NME3-203ENST00000563367 NAGSQ8N159 534 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 TAB3Q8N5C8 712 aaPredicted RBP27.99■■■□□ 2.07
NME3-203ENST00000563367 VPS35Q96QK1 796 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 FRMD8P1Q9BZ68 369 aaPredicted RBP27.99■■■□□ 2.07
NME3-203ENST00000563367 NRSN2Q9GZP1 204 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 SYNDIG1Q9H7V2 258 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 LRIT1Q9P2V4 623 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 APPL1Q9UKG1 709 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 KCTD3Q9Y597 815 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 ZZEF1O43149 2961 aa27.99■■■□□ 2.07
NME3-203ENST00000563367 A0A1W2PQM1 296 aa27.98■■■□□ 2.07
NME3-203ENST00000563367 NTN3O00634 580 aaPredicted RBP27.98■■■□□ 2.07
NME3-203ENST00000563367 GPR39O43194 453 aa27.98■■■□□ 2.07
NME3-203ENST00000563367 GRID2O43424 1007 aa27.98■■■□□ 2.07
NME3-203ENST00000563367 SPAM1P38567 509 aa27.98■■■□□ 2.07
NME3-203ENST00000563367 LRP8Q14114 963 aa27.98■■■□□ 2.07
NME3-203ENST00000563367 TAF1AQ15573 450 aaPredicted RBP27.98■■■□□ 2.07
NME3-203ENST00000563367 ISXQ2M1V0 245 aa27.98■■■□□ 2.07
NME3-203ENST00000563367 PHYKPLQ8IUZ5 450 aa27.98■■■□□ 2.07
NME3-203ENST00000563367 ARL14Q8N4G2 192 aa27.98■■■□□ 2.07
NME3-203ENST00000563367 Q8N9G6 341 aaPredicted RBP27.98■■■□□ 2.07
NME3-203ENST00000563367 KCNF1Q9H3M0 494 aa27.98■■■□□ 2.07
NME3-203ENST00000563367 ARNT2Q9HBZ2 717 aa27.98■■■□□ 2.07
NME3-203ENST00000563367 DKK4Q9UBT3 224 aa27.98■■■□□ 2.07
NME3-203ENST00000563367 PKP3Q9Y446 797 aa27.98■■■□□ 2.07
NME3-203ENST00000563367 STX7O15400 261 aaKnown RBP27.97■■■□□ 2.07
NME3-203ENST00000563367 UGT1A9O60656 530 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 EML2O95834 649 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 ACP5P13686 325 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 UGT1A6P19224 532 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 LPOP22079 712 aaPredicted RBP27.97■■■□□ 2.07
NME3-203ENST00000563367 UGT1A1P22309 533 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 UGT1A4P22310 534 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 STIP1P31948 543 aaKnown RBP27.97■■■□□ 2.07
NME3-203ENST00000563367 UGT1A3P35503 534 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 UGT1A5P35504 534 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 RTP5Q14D33 572 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 ZDHHC20Q5W0Z9 365 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 RBM44Q6ZP01 1051 aaKnown RBP27.97■■■□□ 2.07
NME3-203ENST00000563367 PROSER1Q86XN7 944 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 DTX3LQ8TDB6 740 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 NXPE2Q96DL1 559 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 UGT1A7Q9HAW7 530 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 UGT1A10Q9HAW8 530 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 UGT1A8Q9HAW9 530 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 ZNF148Q9UQR1 794 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 KCNK6Q9Y257 313 aa27.97■■■□□ 2.07
NME3-203ENST00000563367 GLYATL1P3A0A0U1RQE8 302 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 CHUKO15111 745 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 NUDT21O43809 227 aaKnown RBP27.96■■■□□ 2.07
NME3-203ENST00000563367 TCEA3O75764 348 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 RPLP0P05388 317 aaKnown RBP27.96■■■□□ 2.07
NME3-203ENST00000563367 PNLIPP16233 465 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 CXCR5P32302 372 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 SPIDRQ14159 915 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 P3H1Q32P28 736 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 PRUNE1Q86TP1 453 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 CCNJLQ8IV13 435 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 OR4K2Q8NGD2 314 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 WDR48Q8TAF3 677 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 BRSK1Q8TDC3 778 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 LRRN3Q9H3W5 708 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 ENTPD2Q9Y5L3 495 aa27.96■■■□□ 2.07
NME3-203ENST00000563367 C2orf81A6NN90 581 aa27.95■■■□□ 2.06
NME3-203ENST00000563367 SRRM3A6NNA2 597 aaPredicted RBP27.95■■■□□ 2.06
NME3-203ENST00000563367 PPFIA2O75334 1257 aa27.95■■■□□ 2.06
NME3-203ENST00000563367 PDX1P52945 283 aa27.95■■■□□ 2.06
NME3-203ENST00000563367 PEX6Q13608 980 aa27.95■■■□□ 2.06
NME3-203ENST00000563367 CRTC3Q6UUV7 619 aa27.95■■■□□ 2.06
NME3-203ENST00000563367 SPRED1Q7Z699 444 aa27.95■■■□□ 2.06
NME3-203ENST00000563367 REXO1L1PQ8IX06 675 aa27.95■■■□□ 2.06
NME3-203ENST00000563367 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.95■■■□□ 2.06
NME3-203ENST00000563367 TBC1D29Q9UFV1 150 aa27.95■■■□□ 2.06
NME3-203ENST00000563367 AK5Q9Y6K8 562 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms