RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 SLITRK4Q8IW52 837 aa25.07■■□□□ 1.6
NME3-202ENST00000561637 FBXO39Q8N4B4 442 aa25.07■■□□□ 1.6
NME3-202ENST00000561637 GPR26Q8NDV2 337 aa25.07■■□□□ 1.6
NME3-202ENST00000561637 EXD1Q8NHP7 514 aa25.07■■□□□ 1.6
NME3-202ENST00000561637 NUDT22Q9BRQ3 303 aa25.07■■□□□ 1.6
NME3-202ENST00000561637 DNPEPQ9ULA0 475 aa25.07■■□□□ 1.6
NME3-202ENST00000561637 REXO2Q9Y3B8 237 aaKnown RBP25.07■■□□□ 1.6
NME3-202ENST00000561637 PPM1DO15297 605 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 ITIH1P19827 911 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 ALDH4A1P30038 563 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 CCKBRP32239 447 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 ETV5P41161 510 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 ZFP36L1Q07352 338 aaKnown RBP25.06■■□□□ 1.6
NME3-202ENST00000561637 TEX44Q53QW1 395 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 NKAIN2Q5VXU1 208 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 ZC3H18Q86VM9 953 aaKnown RBP25.06■■□□□ 1.6
NME3-202ENST00000561637 GAS2L3Q86XJ1 694 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 GALNT13Q8IUC8 556 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 ADGRE3Q9BY15 652 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 CDH19Q9H159 772 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 PKD2L2Q9NZM6 624 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 PISDQ9UG56 409 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 ZNF711Q9Y462 761 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 LOXL2Q9Y4K0 774 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 DUSP10Q9Y6W6 482 aa25.06■■□□□ 1.6
NME3-202ENST00000561637 RHPN2P1A8MT19 583 aa25.05■■□□□ 1.6
NME3-202ENST00000561637 PNLIPP16233 465 aa25.05■■□□□ 1.6
NME3-202ENST00000561637 NFKB1P19838 968 aa25.05■■□□□ 1.6
NME3-202ENST00000561637 CDK18Q07002 472 aa25.05■■□□□ 1.6
NME3-202ENST00000561637 MAP9Q49MG5 647 aa25.05■■□□□ 1.6
NME3-202ENST00000561637 ZNF574Q6ZN55 896 aaPredicted RBP25.05■■□□□ 1.6
NME3-202ENST00000561637 ATG14Q6ZNE5 492 aa25.05■■□□□ 1.6
NME3-202ENST00000561637 KATNAL2Q8IYT4 538 aa25.05■■□□□ 1.6
NME3-202ENST00000561637 TEKT5Q96M29 485 aa25.05■■□□□ 1.6
NME3-202ENST00000561637 HEMGNQ9BXL5 484 aa25.05■■□□□ 1.6
NME3-202ENST00000561637 ZNHIT2Q9UHR6 403 aa25.05■■□□□ 1.6
NME3-202ENST00000561637 KCNK6Q9Y257 313 aa25.05■■□□□ 1.6
NME3-202ENST00000561637 FLNCQ14315 2725 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 A0A0A6YYK5 440 aaPredicted RBP25.04■■□□□ 1.6
NME3-202ENST00000561637 SUV39H1O43463 412 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 TFDP2Q14188 446 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 C16orf72Q14CZ0 275 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 PHF19Q5T6S3 580 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 C11orf63Q6NUN7 778 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 KDELC1Q6UW63 502 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 RAD9BQ6WBX8 426 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 CCHCR1Q8TD31 782 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 SLC37A2Q8TED4 501 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 TFB1MQ8WVM0 346 aaKnown RBP25.04■■□□□ 1.6
NME3-202ENST00000561637 SGF29Q96ES7 293 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 TMEM74Q96NL1 305 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 STRADBQ9C0K7 418 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 ZFYVE1Q9HBF4 777 aa25.04■■□□□ 1.6
NME3-202ENST00000561637 FAM87AP0C7U9 286 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 ACP5P13686 325 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 CD1CP29017 333 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 CSF2RBP32927 897 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 CHRNA4P43681 627 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 NR1D2Q14995 579 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 SPA17Q15506 151 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 TFDP3Q5H9I0 405 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 CHST15Q7LFX5 561 aaPredicted RBP25.03■■□□□ 1.6
NME3-202ENST00000561637 TMC3Q7Z5M5 1100 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 JAMLQ86YT9 394 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 CCDC50Q8IVM0 306 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 CCDC170Q8IYT3 715 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 ACRBPQ8NEB7 543 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 OXNAD1Q96HP4 312 aaPredicted RBP25.03■■□□□ 1.6
NME3-202ENST00000561637 ARHGAP9Q9BRR9 750 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 SPATA16Q9BXB7 569 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 TMEM9Q9P0T7 183 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 ATXN10Q9UBB4 475 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 TBC1D29Q9UFV1 150 aa25.03■■□□□ 1.6
NME3-202ENST00000561637 NDST3O95803 873 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 PYGLP06737 847 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 ZNF8P17098 575 aaPredicted RBP25.02■■□□□ 1.6
NME3-202ENST00000561637 BPIP17213 487 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 FECHP22830 423 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 MPSTP25325 297 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 NR2C2P49116 596 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 KHDC1Q4VXA5 237 aaKnown RBP25.02■■□□□ 1.6
NME3-202ENST00000561637 ZNF567Q8N184 647 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 RCBTB1Q8NDN9 531 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 QKIQ96PU8 341 aaKnown RBP eCLIP25.02■■□□□ 1.6
NME3-202ENST00000561637 OR2AG1Q9H205 316 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 BPIFA1Q9NP55 256 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 VPS18Q9P253 973 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 TMPRSS11EQ9UL52 423 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 PCDHGA7Q9Y5G6 932 aa25.02■■□□□ 1.6
NME3-202ENST00000561637 EPN1Q9Y6I3 576 aaPredicted RBP25.02■■□□□ 1.6
NME3-202ENST00000561637 MTX2O75431 263 aa25.01■■□□□ 1.59
NME3-202ENST00000561637 ZRANB2O95218 330 aaKnown RBP eCLIP25.01■■□□□ 1.597e-7■■■■□ 23.2
NME3-202ENST00000561637 NDUFA10O95299 355 aa25.01■■□□□ 1.59
NME3-202ENST00000561637 CYLC1P35663 651 aaPredicted RBP25.01■■□□□ 1.59
NME3-202ENST00000561637 WNT3AP56704 352 aa25.01■■□□□ 1.59
NME3-202ENST00000561637 AADACL2Q6P093 401 aa25.01■■□□□ 1.59
NME3-202ENST00000561637 DAAM2Q86T65 1068 aa25.01■■□□□ 1.59
NME3-202ENST00000561637 RAVER1Q8IY67 606 aaKnown RBP25.01■■□□□ 1.59
NME3-202ENST00000561637 RCOR2Q8IZ40 523 aa25.01■■□□□ 1.59
NME3-202ENST00000561637 SLC25A41Q8N5S1 370 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms