RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	BNIP3L	O60238	219 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	PLIN3	O60664	434 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	ATG13	O75143	517 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	HAUS5	O94927	633 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	POP4	O95707	220 aa	Known RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	S1PR4	O95977	384 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	UGT2B4	P06133	528 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	ATP5B	P06576	529 aa	Known RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	GSTA1	P08263	222 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	VIM	P08670	466 aa	Known RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	ALPI	P09923	528 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	CEACAM1	P13688	526 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	CTPS1	P17812	591 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	PSMC3	P17980	439 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	CRABP2	P29373	138 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	HNF1B	P35680	557 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	NNMT	P40261	264 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	RECQL	P46063	649 aa	Predicted RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	SLC6A11	P48066	632 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	SERPINB4	P48594	390 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	CCT5	P48643	541 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	STC1	P52823	247 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	IRF9	Q00978	393 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	POU4F1	Q01851	419 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	KDSR	Q06136	332 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	MESP2	Q0VG99	397 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	SEMA3A	Q14563	771 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	USP10	Q14694	798 aa	Known RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	EIF4H	Q15056	248 aa	Known RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	PTPRR	Q15256	657 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	ZKSCAN8	Q15776	578 aa	Predicted RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	PTPRN	Q16849	979 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	TYSND1	Q2T9J0	566 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	COL28A1	Q2UY09	1125 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	ACCSL	Q4AC99	568 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	ZNF789	Q5FWF6	425 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	CNST	Q6PJW8	725 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	LYSMD3	Q7Z3D4	306 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	CLEC14A	Q86T13	490 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	ZSWIM9	Q86XI8	627 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	PROSER1	Q86XN7	944 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	SLC41A1	Q8IVJ1	513 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	PHTF2	Q8N3S3	785 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	KDM1B	Q8NB78	822 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	ARMC2	Q8NEN0	867 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	OR2A12	Q8NGT7	310 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	SCG3	Q8WXD2	468 aa	Known RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	ELMO2	Q96JJ3	720 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	ZNF641	Q96N77	438 aa	Predicted RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	BBC3	Q96PG8	261 aa	Predicted RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	MCCC1	Q96RQ3	725 aa	Predicted RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	LYSMD1	Q96S90	227 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	C19orf43	Q9BQ61	176 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	GPR63	Q9BZJ6	419 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	FAM107B	Q9H098	131 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	NSRP1	Q9H0G5	558 aa	Known RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	VPS11	Q9H270	941 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	INTS10	Q9NVR2	710 aa	Known RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	ELOVL2	Q9NXB9	296 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	IL17C	Q9P0M4	197 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	DEC1	Q9P2X7	70 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	DCDC2	Q9UHG0	476 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	KLK13	Q9UKR3	277 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	EMCN	Q9ULC0	261 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	CORO1C	Q9ULV4	474 aa	Predicted RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	PHTF1	Q9UMS5	762 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	SLC8A2	Q9UPR5	921 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	ANKRD6	Q9Y2G4	727 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	MSRB2	Q9Y3D2	182 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	APC2	O95996	2303 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395		A0A0U1RQS6	177 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	C1orf232	A0A0U1RR37	186 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	LNP1	A1A4G5	178 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	EIF4E1B	A6NMX2	242 aa	Known RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	PRRT4	C9JH25	899 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	ARNTL	O00327	626 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	BIRC5	O15392	142 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	PLXNA2	O75051	1894 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	PROC	P04070	461 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	C2	P06681	752 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	SLC35E2B	P0CK96	405 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	PRSS56	P0CW18	603 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	STMN1	P16949	149 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	CSRP1	P21291	193 aa	Known RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	MC4R	P32245	332 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	GJA4	P35212	333 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	HMGCL	P35914	325 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	GMPR	P36959	345 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	OPRD1	P41143	372 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	EIF2D	P41214	584 aa	Known RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	SOX9	P48436	509 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	PXN	P49023	591 aa	Predicted RBP	7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	TAS2R39	P59534	338 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	RAB10	P61026	200 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	ST8SIA6	P61647	398 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	XIAP	P98170	497 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	PEX6	Q13608	980 aa		7.48	□□□□□ -1.21
TPM1-231	ENST00000561395	RUNX3	Q13761	415 aa		7.48	□□□□□ -1.21

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