RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ZBTB2Q8N680 514 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 BCORP1Q8N888 145 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 FNIP1Q8TF40 1166 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 NT5C3BQ969T7 300 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 CNDP1Q96KN2 507 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 MLPHQ9BV36 600 aaPredicted RBP9.41□□□□□ -0.9
HERC1-210ENST00000560897 NLNQ9BYT8 704 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 UCK1Q9HA47 277 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 FGF21Q9NSA1 209 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 TBC1D29Q9UFV1 150 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 KCNK6Q9Y257 313 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 PADI2Q9Y2J8 665 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 PCDHGB6Q9Y5F9 930 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 PMM2O15305 246 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 P4HA2O15460 535 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 KIF1CO43896 1103 aaKnown RBP9.4□□□□□ -0.9
HERC1-210ENST00000560897 ACP5P13686 325 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 VIPR1P32241 457 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 OTX2P32243 289 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 TSFMP43897 325 aaKnown RBP9.4□□□□□ -0.9
HERC1-210ENST00000560897 ARCN1P48444 511 aaKnown RBP9.4□□□□□ -0.9
HERC1-210ENST00000560897 CASP6P55212 293 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 NRG1Q02297 640 aaPredicted RBP9.4□□□□□ -0.9
HERC1-210ENST00000560897 CYTH1Q15438 398 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 PARP15Q460N3 678 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 CCDC40Q4G0X9 1142 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 PTPN20Q4JDL3 420 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 TRIM74Q86UV6 250 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 TGIF2LYQ8IUE0 185 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 PPP4R1Q8TF05 950 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 KLHL6Q8WZ60 621 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 SHC3Q92529 594 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 UBXN4Q92575 508 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 ZNF514Q96K75 400 aaPredicted RBP9.4□□□□□ -0.9
HERC1-210ENST00000560897 KREMEN1Q96MU8 473 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 ZNF552Q9H707 407 aaPredicted RBP9.4□□□□□ -0.9
HERC1-210ENST00000560897 UBE2TQ9NPD8 197 aaPredicted RBP9.4□□□□□ -0.9
HERC1-210ENST00000560897 ACP6Q9NPH0 428 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 OGFRQ9NZT2 677 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 PCDHA7Q9UN72 937 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 CNTN6Q9UQ52 1028 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 MTMR6Q9Y217 621 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 ATP6V1DQ9Y5K8 247 aa9.4□□□□□ -0.9
HERC1-210ENST00000560897 ABCA4P78363 2273 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 CACNA1CQ13936 2221 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 A0A1W2PQ67 120 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 C9J4A7 227 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 PSMD11O00231 422 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 LRIG2O94898 1065 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 HEXIM1O94992 359 aaKnown RBP9.39□□□□□ -0.91
HERC1-210ENST00000560897 EBLN1P0CF75 366 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 FOLR1P15328 257 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 KLK2P20151 261 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 KRT9P35527 623 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 SMSP52788 366 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 KCNK10P57789 538 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 YBEYP58557 167 aaPredicted RBP9.39□□□□□ -0.91
HERC1-210ENST00000560897 OTUD4Q01804 1114 aaKnown RBP9.39□□□□□ -0.91
HERC1-210ENST00000560897 GPS2Q13227 327 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 KCNAB1Q14722 419 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 ZNF169Q14929 603 aaPredicted RBP9.39□□□□□ -0.91
HERC1-210ENST00000560897 MANEALQ5VSG8 457 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 IRAK1BP1Q5VVH5 260 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 B3GNTL1Q67FW5 361 aaPredicted RBP9.39□□□□□ -0.91
HERC1-210ENST00000560897 ADAMTSL4Q6UY14 1074 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 ENOSF1Q7L5Y1 443 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 TTC30BQ8N4P2 665 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 WDTC1Q8N5D0 677 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 RTL3Q8N8U3 475 aaKnown RBP9.39□□□□□ -0.91
HERC1-210ENST00000560897 EHBP1Q8NDI1 1231 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 DNAJB14Q8TBM8 379 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 CPT1BQ92523 772 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 RSC1A1Q92681 617 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 AP2M1Q96CW1 435 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 ECHDC3Q96DC8 303 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 MTFMTQ96DP5 389 aaKnown RBP9.39□□□□□ -0.91
HERC1-210ENST00000560897 CLIP3Q96DZ5 547 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 MAGEB10Q96LZ2 347 aaPredicted RBP9.39□□□□□ -0.91
HERC1-210ENST00000560897 CFAP57Q96MR6 1250 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 GBP5Q96PP8 586 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 SLX1AQ9BQ83 275 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 CINPQ9BW66 212 aaPredicted RBP9.39□□□□□ -0.91
HERC1-210ENST00000560897 SLC7A5P2Q9GIP4 190 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 PDCL3Q9H2J4 239 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 OSGEPL1Q9H4B0 414 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 FANCEQ9HB96 536 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 SH3BGRL2Q9UJC5 107 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 PCDHGC3Q9UN70 934 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 ZNF469Q96JG9 3925 aaPredicted RBP9.39□□□□□ -0.91
HERC1-210ENST00000560897 RTTNQ86VV8 2226 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 ACANP16112 2415 aa9.39□□□□□ -0.91
HERC1-210ENST00000560897 MEN1O00255 615 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 CREB3O43889 395 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 PALMO75781 387 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 JCHAINP01591 159 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 C8BP07358 591 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 ESRRAP11474 423 aaPredicted RBP9.38□□□□□ -0.91
HERC1-210ENST00000560897 EPHB2P29323 1055 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 CA5AP35218 305 aa9.38□□□□□ -0.91
HERC1-210ENST00000560897 FLT3P36888 993 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms