RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 DNTTP04053 509 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 INHAP05111 366 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 NR2F1P10589 423 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 SP100P23497 879 aaPredicted RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 SLC7A2P52569 658 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 RABGGTBP53611 331 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 TIGD5Q53EQ6 642 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 KIAA0930Q6ICG6 404 aaPredicted RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 GALNT18Q6P9A2 607 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 CRYBG2Q8N1P7 616 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 ZNF781Q8N8C0 355 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 WDR36Q8NI36 951 aaKnown RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 SLC35B2Q8TB61 432 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 ANKRD49Q8WVL7 239 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 AARSD1Q9BTE6 412 aaKnown RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 POLR3BQ9NW08 1133 aaPredicted RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 SCML2Q9UQR0 700 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 DMTF1Q9Y222 760 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 FOXO6A8MYZ6 492 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 CA12O43570 354 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 PCCBP05166 539 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 SLC1A2P43004 574 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 DLG2Q15700 870 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 CPSF6Q16630 551 aaKnown RBP eCLIP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 DGKKQ5KSL6 1271 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 CPTPQ5TA50 214 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 WDR48Q8TAF3 677 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 WDR60Q8WVS4 1066 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 BORCS6Q96GS4 357 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 SMAD5Q99717 465 aaKnown RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 AIF1LQ9BQI0 150 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 DGCR6LQ9BY27 220 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 WDR55Q9H6Y2 383 aaPredicted RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 NR2E1Q9Y466 385 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 IRGMA1A4Y4 181 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 CENPXA8MT69 81 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 IRAK2O43187 625 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 NDUFB5O43674 189 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 SLC28A2O43868 658 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 PRAMEF1O95521 474 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 POP4O95707 220 aaKnown RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 CFHP08603 1231 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 DNAJB1P25685 340 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 CDH5P33151 784 aaPredicted RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 MTHFRP42898 656 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 PTGER3P43115 390 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 GNPDA1P46926 289 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 AP5B1Q2VPB7 878 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 TPGS2Q68CL5 300 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 MPP5Q8N3R9 675 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 SIDT2Q8NBJ9 832 aaKnown RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 RBM15BQ8NDT2 890 aaKnown RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 BPIFB6Q8NFQ5 453 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 PHF10Q8WUB8 498 aaKnown RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 SNRNP27Q8WVK2 155 aaKnown RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 NACC2Q96BF6 587 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 MFSD3Q96ES6 412 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 DEPDC7Q96QD5 511 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 HTATIP2Q9BUP3 242 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 NUSAP1Q9BXS6 441 aaKnown RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 PAIP1Q9H074 479 aaKnown RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 RHBGQ9H310 441 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 NOL11Q9H8H0 719 aaKnown RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 SEMA3GQ9NS98 782 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 DDX18Q9NVP1 670 aaKnown RBP6.89□□□□□ -1.31
AP4E1-203ENST00000560508 EGFL7Q9UHF1 273 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 AP4B1Q9Y6B7 739 aa6.89□□□□□ -1.31
AP4E1-203ENST00000560508 ZNF487B1APH4 448 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 SUV39H1O43463 412 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 MT-CYBP00156 380 aaPredicted RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 FGBP02675 491 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 PRNPP04156 253 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CCNYL3P0C7X3 344 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 PSMD8P48556 350 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 SLC18A1P54219 525 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 PRKAG1P54619 331 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 LCP2Q13094 533 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 TRIM25Q14258 630 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CCL14Q16627 93 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ZIK1Q3SY52 487 aaPredicted RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 LDLRAP1Q5SW96 308 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 CRTC3Q6UUV7 619 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 OLFML1Q6UWY5 402 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 LINGO4Q6UY18 593 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 SERPINA9Q86WD7 417 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 AMIGO3Q86WK7 504 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 FITM2Q8N6M3 262 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 UBR7Q8N806 425 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 FAM13CQ8NE31 585 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 C10orf82Q8WW14 230 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 VPS35Q96QK1 796 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 TNKS2Q9H2K2 1166 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 SOHLH2Q9NX45 425 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 DUS2Q9NX74 493 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 RSL24D1Q9UHA3 163 aaKnown RBP6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ASF1AQ9Y294 204 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 GSTK1Q9Y2Q3 226 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 TSC22D4Q9Y3Q8 395 aa6.88□□□□□ -1.31
AP4E1-203ENST00000560508 ARL5AQ9Y689 179 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms