RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 PTMAP06454 111 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 ACP5P13686 325 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 HLA-DPA1P20036 260 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 HMGCLP35914 325 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 GEMP55040 296 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 GDF10P55107 478 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 OR1D5P58170 312 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 GABREP78334 506 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 SPIDRQ14159 915 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 SPARCL1Q14515 664 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 ATP13A5Q4VNC0 1218 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 C3orf38Q5JPI3 329 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 ITPRIPL1Q6GPH6 555 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 C19orf48Q6RUI8 117 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 RANBP10Q6VN20 620 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 TMPRSS9Q7Z410 1059 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 SPRED1Q7Z699 444 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 ADGRG6Q86SQ4 1221 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 LRRC8AQ8IWT6 810 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 ARL14Q8N4G2 192 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 TAB3Q8N5C8 712 aaPredicted RBP11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 TRAM1L1Q8N609 369 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 SLC35B2Q8TB61 432 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 GLYATL1Q969I3 302 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 GFM1Q96RP9 751 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 ZSCAN5AQ9BUG6 496 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 FSD1LQ9BXM9 530 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 TSGA10Q9BZW7 698 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 LRRN3Q9H3W5 708 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 LZTFL1Q9NQ48 299 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 IL17CQ9P0M4 197 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 TBC1D29Q9UFV1 150 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 APPL1Q9UKG1 709 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 SATB2Q9UPW6 733 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 KCNK6Q9Y257 313 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 KCTD3Q9Y597 815 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 PTPRQQ9UMZ3 2332 aa11.53□□□□□ -0.56
RABGGTA-216ENST00000560243 C5orf60A6NFR6 353 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 D6RAR5 112 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 AGRPO00253 132 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 GAPDHSO14556 408 aaPredicted RBP11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 PPM1DO15297 605 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 KRT86O43790 486 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 NUDT21O43809 227 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 NUAK1O60285 661 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 UGT1A9O60656 530 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 STK10O94804 968 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 METTL18O95568 372 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 UGT1A6P19224 532 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 UGT1A1P22309 533 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 UGT1A4P22310 534 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 UGT1A3P35503 534 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 UGT1A5P35504 534 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 B4GALNT1Q00973 533 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 MSLNQ13421 630 aaPredicted RBP11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 CHRNA6Q15825 494 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 DENND5AQ6IQ26 1287 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 CRTC3Q6UUV7 619 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 FAM151BQ6UXP7 276 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 MICALCLQ6ZW33 695 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 GLT6D1Q7Z4J2 308 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 ZNF438Q7Z4V0 828 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 CCDC112Q8NEF3 446 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 OR6C4Q8NGE1 309 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 HNRNPLLQ8WVV9 542 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 PRR11Q96HE9 360 aaPredicted RBP11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 DCBLD2Q96PD2 775 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 PLEKHG4BQ96PX9 1271 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 SRPK1Q96SB4 655 aaKnown RBP11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 FERMT1Q9BQL6 677 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 TMEM121Q9BTD3 319 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 TRABDQ9H4I3 376 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 POLR1BQ9H9Y6 1135 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 UGT1A7Q9HAW7 530 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 UGT1A10Q9HAW8 530 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 UGT1A8Q9HAW9 530 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 TRIM39Q9HCM9 518 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 RAD18Q9NS91 495 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 SLC23A2Q9UGH3 650 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 ARL5AQ9Y689 179 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 ADAMTS20P59510 1910 aa11.52□□□□□ -0.57
RABGGTA-216ENST00000560243 ZNF106Q9H2Y7 1883 aaKnown RBP11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 AHCTF1Q8WYP5 2266 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 A6NCN8 305 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 GOLGA6L9A6NEM1 432 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 RHPN2P1A8MT19 583 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 CHUKO15111 745 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 GRID2O43424 1007 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 SNX2O60749 519 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 CCDC175P0C221 793 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 PNLIPP16233 465 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 ALDH4A1P30038 563 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 TNNT3P45378 269 aaPredicted RBP11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 LSSP48449 732 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 LRP8Q14114 963 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 PLA2G4EQ3MJ16 856 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 AMZ1Q400G9 498 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 MEI1Q5TIA1 1274 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 FOXR1Q6PIV2 292 aa11.51□□□□□ -0.57
RABGGTA-216ENST00000560243 USP53Q70EK8 1073 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms