RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 PCDHGA9Q9Y5G4 932 aaKnown RBP19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 SLC30A1Q9Y6M5 507 aa19.53■□□□□ 0.72
RABGGTA-214ENST00000560163 A0A0J9YYE9 177 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 SPAG6O75602 509 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 CLDN1O95832 211 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 TRBC1P01850 177 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 ACP5P13686 325 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 SLC2A4P14672 509 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 XRCC1P18887 633 aaPredicted RBP19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 PSMA2P25787 234 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 DCTP40126 519 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 ZNF135P52742 658 aaPredicted RBP19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 DNASE1L3Q13609 305 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 ACAD10Q6JQN1 1059 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 RASGRP3Q8IV61 690 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 RAVER1Q8IY67 606 aaKnown RBP19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 CT55Q8WUE5 264 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 RMI1Q9H9A7 625 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 LHX9Q9NQ69 397 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 ETNK2Q9NVF9 386 aa19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 RCOR3Q9P2K3 495 aaPredicted RBP19.52■□□□□ 0.72
RABGGTA-214ENST00000560163 TCP11X1B4DZS4 312 aa19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 C21orf140B9A014 251 aa19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 SNX2O60749 519 aa19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 CCNYL3P0C7X3 344 aa19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 DESP17661 470 aa19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 MIPP30301 263 aa19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 LEPRP48357 1165 aaKnown RBP19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 SEPHS1P49903 392 aa19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 CLCNKAP51800 687 aa19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 EIF2S3LQ2VIR3 472 aaKnown RBP19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 MAMDC2Q7Z304 686 aaPredicted RBP19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 TICAM1Q8IUC6 712 aa19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 AVL9Q8NBF6 648 aa19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 KLHL6Q8WZ60 621 aa19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 AKIRIN1Q9H9L7 192 aaPredicted RBP19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 SEPT11Q9NVA2 429 aaKnown RBP19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 SCHIP1Q9P0W5 487 aaPredicted RBP19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 ADGRG1Q9Y653 693 aa19.51■□□□□ 0.71
RABGGTA-214ENST00000560163 FBN2P35556 2912 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 UBXN7O94888 489 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 TYRP1P17643 537 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 MMP13P45452 471 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 PGDP52209 483 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 LAMB3Q13751 1172 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 INPP5JQ15735 1006 aaPredicted RBP19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 MARC1Q5VT66 337 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 PLEKHA7Q6IQ23 1121 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 TMEM26Q6ZUK4 368 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 NDUFAF2Q8N183 169 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 TEX26Q8N6G2 289 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 AOPEPQ8N6M6 819 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 ELMO2Q96JJ3 720 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 TGM7Q96PF1 710 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 RUFY1Q96T51 708 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 BRD8Q9H0E9 1235 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 ACTL8Q9H568 366 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 CASS4Q9NQ75 786 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 IGSF5Q9NSI5 407 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 TAS2R14Q9NYV8 317 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 LNPEPQ9UIQ6 1025 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 OTOGQ6ZRI0 2925 aa19.5■□□□□ 0.71
RABGGTA-214ENST00000560163 TMEM191CA6NGB0 347 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 FADS2P1A8MWK0 482 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 KIF1CO43896 1103 aaKnown RBP19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 PRPSAP2O60256 369 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 NUAK1O60285 661 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 TIAF1O95411 115 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 CLDN7O95471 211 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 MT-ND3P03897 115 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 AMPD1P23109 780 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 CASP14P31944 242 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 MRPL49Q13405 166 aaKnown RBP19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 SYCP1Q15431 976 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 UGT8Q16880 541 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 HENMT1Q5T8I9 393 aaKnown RBP19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 CPZQ66K79 652 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 PRSS42Q7Z5A4 293 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 BBS5Q8N3I7 341 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 Q8NA96 180 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 THAP4Q8WY91 577 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 SLC25A23Q9BV35 468 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 TRIM7Q9C029 511 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 PARVAQ9NVD7 372 aa19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 ZNF624Q9P2J8 865 aaPredicted RBP19.49■□□□□ 0.71
RABGGTA-214ENST00000560163 GRID2O43424 1007 aa19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 LRCH4O75427 683 aa19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 PRLP01236 227 aa19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 SLC19A1P41440 591 aa19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 CDH6P55285 790 aa19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 KRT31Q15323 416 aa19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 PRR30Q53SZ7 412 aaPredicted RBP19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 CDKAL1Q5VV42 579 aa19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 PPP1R3BQ86XI6 285 aa19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 SEC14L1Q92503 715 aa19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 TCTN2Q96GX1 697 aa19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 SYT11Q9BT88 431 aa19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 GPR87Q9BY21 358 aa19.48■□□□□ 0.71
RABGGTA-214ENST00000560163 CARD9Q9H257 536 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms