RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 PREPLQ4J6C6 727 aaPredicted RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 ZNF805Q5CZA5 627 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 DNAJC21Q5F1R6 531 aaKnown RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 BEND6Q5SZJ8 279 aaPredicted RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 CFAP58Q5T655 872 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 SEL1L3Q68CR1 1132 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 LRRC66Q68CR7 880 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 ZNF776Q68DI1 518 aaPredicted RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 C4orf22Q6V702 233 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 CENPUQ71F23 418 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 HSD11B1LQ7Z5J1 315 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 BBOF1Q8ND07 529 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 AGBL5Q8NDL9 886 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 OR4K2Q8NGD2 314 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 OR13J1Q8NGT2 312 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 GANCQ8TET4 914 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 ANKRD7Q92527 254 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 GATA6Q92908 595 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 CAVIN3Q969G5 261 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 FUBP1Q96AE4 644 aaKnown RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 STAMBPL1Q96FJ0 436 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 MRGPRX1Q96LB2 322 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 TUBGCP5Q96RT8 1024 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 EBNA1BP2Q99848 306 aaKnown RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 MYOCQ99972 504 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 CPEB1Q9BZB8 566 aaKnown RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 OSBPL6Q9BZF3 934 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 RSPH9Q9H1X1 276 aaPredicted RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 FAM96AQ9H5X1 160 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 VPS37BQ9H9H4 285 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 XAB2Q9HCS7 855 aaKnown RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 C1GALT1Q9NS00 363 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.21□□□□□ -1.58
SPG11-220ENST00000559933 BFARQ9NZS9 450 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 BCCIPQ9P287 314 aaKnown RBP eCLIP5.21□□□□□ -1.58
SPG11-220ENST00000559933 CTNNAL1Q9UBT7 734 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 WNT16Q9UBV4 365 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 MTRF1LQ9UGC7 380 aaKnown RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 ZC3H7BQ9UGR2 993 aaKnown RBP5.21□□□□□ -1.58
SPG11-220ENST00000559933 PCOLCE2Q9UKZ9 415 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 MMP17Q9ULZ9 603 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 SLC8A2Q9UPR5 921 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 CA5BQ9Y2D0 317 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 TCAF1Q9Y4C2 921 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 TEX264Q9Y6I9 313 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 TTC28Q96AY4 2481 aa5.21□□□□□ -1.58
SPG11-220ENST00000559933 PLXNA2O75051 1894 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ZNF106Q9H2Y7 1883 aaKnown RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 CXorf51AA0A1B0GTR3 108 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ZCWPW2A0A1B0GU75 182 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 CCDC151A5D8V7 595 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 GOLGA6CA6NDK9 693 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 GOLGA6BA6NDN3 693 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 TMEM221A6NGB7 291 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 MROH6A6NGR9 719 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 FAM47DPA6NHR8 397 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ERI2A8K979 691 aaKnown RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 C1QTNF3-AMACRE9PGA6 284 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 M0R296 226 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ALOX15BO15296 676 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 PSMD3O43242 534 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 RIPK2O43353 540 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 DCXO43602 365 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ZNF189O75820 626 aaPredicted RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 GOT2P00505 430 aaKnown RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 C1QAP02745 245 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 FAM87AP0C7U9 286 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 GOLGA6DP0CG33 693 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 MLNP12872 115 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 C6P13671 934 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 PGAM1P18669 254 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 CA4P22748 312 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 XPAP23025 273 aaPredicted RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 GCAP28676 217 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 MAT2AP31153 395 aaKnown RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 VIPR1P32241 457 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 MMP12P39900 470 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ETV3P41162 512 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 SLCO1A2P46721 670 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 NEK3P51956 506 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 MRPS21P82921 87 aaKnown RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 MPP1Q00013 466 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 CDK16Q00536 496 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 SIGLEC14Q08ET2 396 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 SRSF5Q13243 272 aaKnown RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 FGL2Q14314 439 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 LRRC32Q14392 662 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 SLC29A2Q14542 456 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 STARD3Q14849 445 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 BRD3Q15059 726 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 SLC14A2Q15849 920 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 UGP2Q16851 508 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ANKRD20A4Q4UJ75 823 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ZNF789Q5FWF6 425 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 PCID2Q5JVF3 399 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 EOGTQ5NDL2 527 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ZNF648Q5T619 568 aaPredicted RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 TSTD2Q5T7W7 516 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 STEAP4Q687X5 459 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms