RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 LILRA5A6NI73 299 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 SMTNL1A8MU46 457 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 GOLGA6L22H0YM25 854 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 KIR2DS3K7RE56 304 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 HLA-DQB2P05538 268 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 MAP4P27816 1152 aaKnown RBP12.96□□□□□ -0.33
TPM1-220ENST00000559556 MAN1A1P33908 653 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 SPINT3P49223 89 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 ABHD18Q0P651 414 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 CDC20Q12834 499 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 KIR2DS5Q14953 304 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 CRTC2Q53ET0 693 aaPredicted RBP12.96□□□□□ -0.33
TPM1-220ENST00000559556 SNAP47Q5SQN1 464 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 CCDC122Q5T0U0 273 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 LYSMD3Q7Z3D4 306 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.33
TPM1-220ENST00000559556 AVL9Q8NBF6 648 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 SYN2Q92777 582 aaPredicted RBP12.96□□□□□ -0.33
TPM1-220ENST00000559556 KIAA1143Q96AT1 154 aaPredicted RBP12.96□□□□□ -0.33
TPM1-220ENST00000559556 SH3KBP1Q96B97 665 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 NAP1L5Q96NT1 182 aaPredicted RBP12.96□□□□□ -0.33
TPM1-220ENST00000559556 ZNF670Q9BS34 389 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 EFHD1Q9BUP0 239 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 EPN3Q9H201 632 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 TRIT1Q9H3H1 467 aaKnown RBP12.96□□□□□ -0.33
TPM1-220ENST00000559556 GPN2Q9H9Y4 310 aaPredicted RBP12.96□□□□□ -0.33
TPM1-220ENST00000559556 RBM22Q9NW64 420 aaKnown RBP eCLIP12.96□□□□□ -0.33
TPM1-220ENST00000559556 SIDT1Q9NXL6 827 aaKnown RBP12.96□□□□□ -0.33
TPM1-220ENST00000559556 TMEM63CQ9P1W3 806 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 PRKAB1Q9Y478 270 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 TTLL3Q9Y4R7 772 aa12.96□□□□□ -0.33
TPM1-220ENST00000559556 SVILO95425 2214 aa12.96□□□□□ -0.34
TPM1-220ENST00000559556 LRBAP50851 2863 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 DOPEY1Q5JWR5 2465 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 LOC101059948A0A1B0GTJ6 334 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 A0A1W2PQJ5 194 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 RGSL1A5PLK6 1076 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 OR5K4A6NMS3 321 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 A8MU76 341 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 STK17BO94768 372 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 DLGAP3O95886 979 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 MMP2P08253 660 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 ANKRD34CP0C6C1 535 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 ACP5P13686 325 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 PPM1FP49593 454 aaPredicted RBP12.95□□□□□ -0.34
TPM1-220ENST00000559556 SRSF1Q07955 248 aaKnown RBP eCLIP12.95□□□□□ -0.344e-10■■■□□ 14.7
TPM1-220ENST00000559556 NIPAL4Q0D2K0 466 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 NFATC2Q13469 925 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 NR1I3Q14994 352 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 HADHQ16836 314 aaKnown RBP12.95□□□□□ -0.34
TPM1-220ENST00000559556 ANKRD20A8PQ5CZ79 823 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 TIPARPQ7Z3E1 657 aaKnown RBP12.95□□□□□ -0.34
TPM1-220ENST00000559556 SLC9B2Q86UD5 537 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 PTRH1Q86Y79 214 aaKnown RBP12.95□□□□□ -0.34
TPM1-220ENST00000559556 LPCAT1Q8NF37 534 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 NCSTNQ92542 709 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 FAF2Q96CS3 445 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 HDAC11Q96DB2 347 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 CTRCQ99895 268 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.95□□□□□ -0.34
TPM1-220ENST00000559556 CARD9Q9H257 536 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 APMAPQ9HDC9 416 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 PKD2L2Q9NZM6 624 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 CPNE7Q9UBL6 633 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 ANAPC2Q9UJX6 822 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 KCNK6Q9Y257 313 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 ADGRG1Q9Y653 693 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 ZGRF1Q86YA3 2104 aa12.95□□□□□ -0.34
TPM1-220ENST00000559556 A0A087X0T9 212 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 ANKRD66B4E2M5 251 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 MYO1FO00160 1098 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 NKX2-8O15522 239 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 NUAK1O60285 661 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 C9P02748 559 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 SERPING1P05155 500 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 FAM228BP0C875 321 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 OAS2P29728 719 aaKnown RBP12.94□□□□□ -0.34
TPM1-220ENST00000559556 CASRP41180 1078 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 STAT5AP42229 794 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 CLCNKAP51800 687 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 UBE2IP63279 158 aaKnown RBP12.94□□□□□ -0.34
TPM1-220ENST00000559556 MAP7Q14244 749 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 PDK2Q15119 407 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 QPCTQ16769 361 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 ATP13A4Q4VNC1 1196 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 COLEC12Q5KU26 742 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 PHYKPLQ8IUZ5 450 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 C9orf43Q8TAL5 461 aaPredicted RBP12.94□□□□□ -0.34
TPM1-220ENST00000559556 STARD8Q92502 1023 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 TBC1D10AQ9BXI6 508 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 FAM83DQ9H4H8 585 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 UCK1Q9HA47 277 aa12.94□□□□□ -0.34
TPM1-220ENST00000559556 NFKBIL1Q9UBC1 381 aaPredicted RBP12.94□□□□□ -0.34
TPM1-220ENST00000559556 GPR89AB7ZAQ6 455 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 POLR1CO15160 346 aaPredicted RBP12.93□□□□□ -0.34
TPM1-220ENST00000559556 GRID2O43424 1007 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 GPR89BP0CG08 455 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 PRKAR1AP10644 381 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 MX2P20592 715 aa12.93□□□□□ -0.34
TPM1-220ENST00000559556 GJC1P36383 396 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms