RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 DDX3YO15523 660 aaKnown RBP12.47□□□□□ -0.41
LRRC28-214ENST00000559433 TLX3O43711 291 aaPredicted RBP12.47□□□□□ -0.41
LRRC28-214ENST00000559433 ANXA9O76027 345 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 SLC25A14O95258 325 aaPredicted RBP12.47□□□□□ -0.41
LRRC28-214ENST00000559433 EPOP01588 193 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 PNLIPP16233 465 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 BPIP17213 487 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 HLA-DPA1P20036 260 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 EIF2S3P41091 472 aaKnown RBP12.47□□□□□ -0.41
LRRC28-214ENST00000559433 PDX1P52945 283 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 GEMP55040 296 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 PCBP4P57723 403 aaKnown RBP12.47□□□□□ -0.41
LRRC28-214ENST00000559433 CCDC173Q0VFZ6 552 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 SLC1A5Q15758 541 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 BROXQ5VW32 411 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 PDPK2PQ6A1A2 396 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 CHST15Q7LFX5 561 aaPredicted RBP12.47□□□□□ -0.41
LRRC28-214ENST00000559433 GLT6D1Q7Z4J2 308 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 PHYKPLQ8IUZ5 450 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 EFCAB3Q8N7B9 438 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 ZNF248Q8NDW4 579 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 WDR36Q8NI36 951 aaKnown RBP12.47□□□□□ -0.41
LRRC28-214ENST00000559433 BLOC1S5Q8TDH9 187 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 PATE1Q8WXA2 126 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 GLYATL1Q969I3 302 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 TMEM74Q96NL1 305 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 FICDQ9BVA6 458 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 OR2AG1Q9H205 316 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 TRABDQ9H4I3 376 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 RMI1Q9H9A7 625 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 EPB41L5Q9HCM4 733 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 ARFGAP3Q9NP61 516 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 HACD3Q9P035 362 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 AKAP7Q9P0M2 348 aaPredicted RBP12.47□□□□□ -0.41
LRRC28-214ENST00000559433 PCYT1BQ9Y5K3 369 aaPredicted RBP12.47□□□□□ -0.41
LRRC28-214ENST00000559433 ADGRG1Q9Y653 693 aa12.47□□□□□ -0.41
LRRC28-214ENST00000559433 ITPR1Q14643 2758 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 A0A1W2PQM1 296 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 EIF4E1BA6NMX2 242 aaKnown RBP12.46□□□□□ -0.41
LRRC28-214ENST00000559433 NUAK1O60285 661 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 ZNF189O75820 626 aaPredicted RBP12.46□□□□□ -0.41
LRRC28-214ENST00000559433 AGTP01019 485 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 ACP5P13686 325 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 PSMB4P28070 264 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 ALDH4A1P30038 563 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 HMGCLP35914 325 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 INHBCP55103 352 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 ERVPABLB-1P60509 514 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 PRPSAP1Q14558 356 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 AMZ1Q400G9 498 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 ANKRD20A2Q5SQ80 823 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 ZNF648Q5T619 568 aaPredicted RBP12.46□□□□□ -0.41
LRRC28-214ENST00000559433 ANKRD20A1Q5TYW2 823 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 ANKRD20A3Q5VUR7 823 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 B3GNT8Q7Z7M8 397 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 PDZD3Q86UT5 571 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 C17orf82Q86X59 251 aaPredicted RBP12.46□□□□□ -0.41
LRRC28-214ENST00000559433 NAGSQ8N159 534 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 TTC30BQ8N4P2 665 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 RNF10Q8N5U6 811 aaKnown RBP12.46□□□□□ -0.41
LRRC28-214ENST00000559433 TTC13Q8NBP0 860 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 CCDC112Q8NEF3 446 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 SNIP1Q8TAD8 396 aaKnown RBP12.46□□□□□ -0.41
LRRC28-214ENST00000559433 CCDC110Q8TBZ0 833 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 CCDC97Q96F63 343 aaPredicted RBP12.46□□□□□ -0.41
LRRC28-214ENST00000559433 NAF1Q96HR8 494 aaKnown RBP12.46□□□□□ -0.41
LRRC28-214ENST00000559433 HES6Q96HZ4 224 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 SPATA13Q96N96 652 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 PLEKHG4BQ96PX9 1271 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 GORASP1Q9BQQ3 440 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 FOXP3Q9BZS1 431 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 CARD9Q9H257 536 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 ATXN10Q9UBB4 475 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 ATXN7L1Q9ULK2 861 aaPredicted RBP12.46□□□□□ -0.41
LRRC28-214ENST00000559433 GUCA1BQ9UMX6 200 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 KCNK6Q9Y257 313 aa12.46□□□□□ -0.41
LRRC28-214ENST00000559433 AAR2Q9Y312 384 aaKnown RBP12.46□□□□□ -0.41
LRRC28-214ENST00000559433 FAM208BQ5VWN6 2430 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 CCDC187A0A096LP49 1063 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 A0A1W2PNU3 283 aaPredicted RBP12.45□□□□□ -0.42
LRRC28-214ENST00000559433 ARHGAP6O43182 974 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 GRID2O43424 1007 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 KRT86O43790 486 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 DXOO77932 396 aaKnown RBP12.45□□□□□ -0.42
LRRC28-214ENST00000559433 TNFSF15O95150 251 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 ZNF8P17098 575 aaPredicted RBP12.45□□□□□ -0.42
LRRC28-214ENST00000559433 SPAM1P38567 509 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 OR1D5P58170 312 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 B4GALNT1Q00973 533 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 MAP9Q49MG5 647 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 ZDHHC20Q5W0Z9 365 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 CRTC3Q6UUV7 619 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 ZNF438Q7Z4V0 828 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 ADGRG6Q86SQ4 1221 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 PIM3Q86V86 326 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 FBXO39Q8N4B4 442 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 LIN37Q96GY3 246 aaPredicted RBP12.45□□□□□ -0.42
LRRC28-214ENST00000559433 SLC46A1Q96NT5 459 aa12.45□□□□□ -0.42
LRRC28-214ENST00000559433 APOL2Q9BQE5 337 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms