RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 TPM1P09493 284 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 ZFXP17010 805 aaPredicted RBP14.78□□□□□ -0.04
LRRC28-213ENST00000559399 TSPAN7P41732 249 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 ARHGAP25P42331 645 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 ARSDP51689 593 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 RAB15P59190 212 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 DCDC1P59894 354 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 KIR2DS5Q14953 304 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 ALS2CLQ60I27 953 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 IYDQ6PHW0 289 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 WDR74Q6RFH5 385 aaPredicted RBP14.78□□□□□ -0.04
LRRC28-213ENST00000559399 SLC9B2Q86UD5 537 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 AVL9Q8NBF6 648 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 NKD1Q969G9 470 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 IMP4Q96G21 291 aaKnown RBP14.78□□□□□ -0.04
LRRC28-213ENST00000559399 AGAP3Q96P47 875 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 OLFM3Q96PB7 478 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 TRIB3Q96RU7 358 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 SPATA16Q9BXB7 569 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 RAD18Q9NS91 495 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 B3GALT1Q9Y5Z6 326 aa14.78□□□□□ -0.04
LRRC28-213ENST00000559399 GPR89AB7ZAQ6 455 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 GRID2O43424 1007 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 SLC28A2O43868 658 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 MTA2O94776 668 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 FAM87AP0C7U9 286 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 GPR89BP0CG08 455 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 F3P13726 295 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 ZNF8P17098 575 aaPredicted RBP14.77□□□□□ -0.05
LRRC28-213ENST00000559399 PTMSP20962 102 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 UGT1A3P35503 534 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 MAPK9P45984 424 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 EPHA4P54764 986 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 NFATC3Q12968 1075 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 SLC14A2Q15849 920 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 PCSK7Q16549 785 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 ODF2Q5BJF6 829 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 SNAP47Q5SQN1 464 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 DCAF12Q5T6F0 453 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 LRRC38Q5VT99 294 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 NT5DC3Q86UY8 548 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 RFX6Q8HWS3 928 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 RHOT2Q8IXI1 618 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 IL22RA1Q8N6P7 574 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 EID2BQ96D98 161 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 CCDC42Q96M95 316 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 ANP32EQ9BTT0 268 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 ZSCAN5AQ9BUG6 496 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.77□□□□□ -0.05
LRRC28-213ENST00000559399 BRD8Q9H0E9 1235 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 SLC25A51Q9H1U9 297 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 MAGEE1Q9HCI5 957 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 ABHD10Q9NUJ1 306 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 SPTLC3Q9NUV7 552 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 OCIAD1Q9NX40 245 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 ATXN10Q9UBB4 475 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 NFKBIL1Q9UBC1 381 aaPredicted RBP14.77□□□□□ -0.05
LRRC28-213ENST00000559399 SHOC2Q9UQ13 582 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 ZNF711Q9Y462 761 aa14.77□□□□□ -0.05
LRRC28-213ENST00000559399 OR5K4A6NMS3 321 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 SLC25A14O95258 325 aaPredicted RBP14.76□□□□□ -0.05
LRRC28-213ENST00000559399 PIRTP0C851 137 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 SFTPCP11686 197 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 SLC1A1P43005 524 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 CLCNKAP51800 687 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 DYNLT1P63172 113 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 CYP4F2P78329 520 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 CDK18Q07002 472 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 TBR1Q16650 682 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 ANKS6Q68DC2 871 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 PDPK2PQ6A1A2 396 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 NPNTQ6UXI9 565 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 PRICKLE2Q7Z3G6 844 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 KDELC2Q7Z4H8 507 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 RHOT1Q8IXI2 618 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 TRAM1L1Q8N609 369 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 BMPERQ8N8U9 685 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 GPR26Q8NDV2 337 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 HTR3CQ8WXA8 447 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 NCSTNQ92542 709 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 TADA1Q96BN2 335 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 TEFMQ96QE5 360 aaKnown RBP14.76□□□□□ -0.05
LRRC28-213ENST00000559399 GPR63Q9BZJ6 419 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 FAM117AQ9C073 453 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 OR2AG1Q9H205 316 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 OSGEPL1Q9H4B0 414 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 EPB41L1Q9H4G0 881 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 NHEJ1Q9H9Q4 299 aaPredicted RBP14.76□□□□□ -0.05
LRRC28-213ENST00000559399 TRIM39Q9HCM9 518 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 ARFGAP3Q9NP61 516 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 CPNE7Q9UBL6 633 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 HEMK1Q9Y5R4 338 aaPredicted RBP14.76□□□□□ -0.05
LRRC28-213ENST00000559399 ADGRG1Q9Y653 693 aa14.76□□□□□ -0.05
LRRC28-213ENST00000559399 A8MU76 341 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 RAD1O60671 282 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 MFAP3LO75121 409 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 LIFP15018 202 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 ZNF648Q5T619 568 aaPredicted RBP14.75□□□□□ -0.05
LRRC28-213ENST00000559399 CCDC70Q6NSX1 233 aa14.75□□□□□ -0.05
LRRC28-213ENST00000559399 CRTC3Q6UUV7 619 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms