RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ISG20Q96AZ6 181 aaKnown RBP7.39□□□□□ -1.23
SPG11-213ENST00000558988 ZNF653Q96CK0 615 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 ARHGEF26Q96DR7 871 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 BMFQ96LC9 184 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 APOLD1Q96LR9 279 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 CNPY3Q9BT09 278 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 TRIM7Q9C029 511 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 NAT10Q9H0A0 1025 aaKnown RBP7.39□□□□□ -1.23
SPG11-213ENST00000558988 HSD3B7Q9H2F3 369 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 TCEAL2Q9H3H9 227 aaPredicted RBP7.39□□□□□ -1.23
SPG11-213ENST00000558988 NOL6Q9H6R4 1146 aaKnown RBP7.39□□□□□ -1.23
SPG11-213ENST00000558988 SUDS3Q9H7L9 328 aaPredicted RBP7.39□□□□□ -1.23
SPG11-213ENST00000558988 NLGN3Q9NZ94 848 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 SIRPGQ9P1W8 387 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 LHX3Q9UBR4 397 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 DAAM1Q9Y4D1 1078 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 PCDHB1Q9Y5F3 818 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 FRYQ5TBA9 3013 aa7.39□□□□□ -1.23
SPG11-213ENST00000558988 PKD1L2Q7Z442 2459 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 SPTY2D1-AS1A0A0U1RR47 76 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 EIF4E1BA6NMX2 242 aaKnown RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 A8MX80 341 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 AQP9O43315 295 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 TLX3O43711 291 aaPredicted RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 AP1G1O43747 822 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 OPA1O60313 960 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 CSO75390 466 aaKnown RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 TM7SF2O76062 418 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 RNF8O76064 485 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 SERPINC1P01008 464 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 PCCBP05166 539 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 CDK4P11802 303 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 ACP1P24666 158 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 LMO1P25800 156 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 IGFALSP35858 605 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 SSR1P43307 286 aaKnown RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 RABIFP47224 123 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 PAPOLAP51003 745 aaKnown RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 ADKP55263 362 aaKnown RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 GSCP56915 257 aaPredicted RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 HNRNPKP61978 463 aaKnown RBP eCLIP7.38□□□□□ -1.23
SPG11-213ENST00000558988 KLHL30Q0D2K2 578 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 EIF2B5Q13144 721 aaKnown RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 ILKQ13418 452 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 MAMLD1Q13495 774 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 SERINC3Q13530 473 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 IRF4Q15306 451 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 KLHL40Q2TBA0 621 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 GUSBP11Q6P575 273 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 APTXQ7Z2E3 356 aaKnown RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 EFL1Q7Z2Z2 1120 aaKnown RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 CAMK1DQ8IU85 385 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 IFI44Q8TCB0 444 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 RAB7BQ96AH8 199 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 PEBP4Q96S96 227 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 KLF6Q99612 283 aaPredicted RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 IL12RB2Q99665 862 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.38□□□□□ -1.23
SPG11-213ENST00000558988 SNRNP25Q9BV90 132 aaKnown RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 CINPQ9BW66 212 aaPredicted RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 C1QTNF7Q9BXJ2 289 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 SLC13A1Q9BZW2 595 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 TTYH3Q9C0H2 523 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 HAUS4Q9H6D7 363 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 ZWILCHQ9H900 591 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 MBNL1Q9NR56 388 aaKnown RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 DLL4Q9NR61 685 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 GULP1Q9UBP9 304 aa7.38□□□□□ -1.23
SPG11-213ENST00000558988 CNOT8Q9UFF9 292 aaKnown RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 APOBEC3BQ9UH17 382 aaKnown RBP7.38□□□□□ -1.23
SPG11-213ENST00000558988 TCRBV5S1A1TA0A578 114 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 ARHGAP42A6NI28 874 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 SMTNL1A8MU46 457 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 FGF10O15520 208 aaPredicted RBP7.37□□□□□ -1.23
SPG11-213ENST00000558988 GPR42O15529 346 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 RRP8O43159 456 aaKnown RBP7.37□□□□□ -1.23
SPG11-213ENST00000558988 PRPSAP2O60256 369 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 USP12O75317 370 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 PALMO75781 387 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 FTLP02792 175 aaPredicted RBP7.37□□□□□ -1.23
SPG11-213ENST00000558988 CSF2P04141 144 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 ANXA6P08133 673 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 GIMD1P0DJR0 217 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 CKMT1AP12532 417 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 CTSEP14091 401 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 NME1P15531 152 aaKnown RBP7.37□□□□□ -1.23
SPG11-213ENST00000558988 MIPP30301 263 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 GJC1P36383 396 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 EIF4A3P38919 411 aaKnown RBP7.37□□□□□ -1.23
SPG11-213ENST00000558988 RGRP47804 291 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 ZNF165P49910 485 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 DUSP3P51452 185 aaPredicted RBP7.37□□□□□ -1.23
SPG11-213ENST00000558988 YBEYP58557 167 aaPredicted RBP7.37□□□□□ -1.23
SPG11-213ENST00000558988 GABREP78334 506 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 E2F1Q01094 437 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 PPARDQ03181 441 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 CYTH1Q15438 398 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 SMTNL2Q2TAL5 461 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 PARP15Q460N3 678 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 TDRD12Q587J7 1177 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms