RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.84■□□□□ 0.29
LRRC28-210ENST00000558879 BROXQ5VW32 411 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 RAD9BQ6WBX8 426 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 ZNF574Q6ZN55 896 aaPredicted RBP16.84■□□□□ 0.29
LRRC28-210ENST00000558879 KDELC2Q7Z4H8 507 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 ZC3H18Q86VM9 953 aaKnown RBP16.84■□□□□ 0.29
LRRC28-210ENST00000558879 TMTC1Q8IUR5 882 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 CCDC50Q8IVM0 306 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 ZNF567Q8N184 647 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 OXNAD1Q96HP4 312 aaPredicted RBP16.84■□□□□ 0.29
LRRC28-210ENST00000558879 CALR3Q96L12 384 aaKnown RBP16.84■□□□□ 0.29
LRRC28-210ENST00000558879 MRGPRX2Q96LB1 330 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 PLEKHG4BQ96PX9 1271 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 FCRL5Q96RD9 977 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 SPATA16Q9BXB7 569 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 RAD18Q9NS91 495 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 UBP1Q9NZI7 540 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 ATXN10Q9UBB4 475 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 FAM153AQ9UHL3 310 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.84■□□□□ 0.29
LRRC28-210ENST00000558879 PRR19A6NJB7 356 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 COL6A6A6NMZ7 2263 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 GPR89AB7ZAQ6 455 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 AURKAO14965 403 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 CHUKO15111 745 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 ATXN7O15265 892 aaPredicted RBP16.83■□□□□ 0.28
LRRC28-210ENST00000558879 PJA2O43164 708 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 EPOP01588 193 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 SLC4A1P02730 911 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 GPR89BP0CG08 455 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 CD1CP29017 333 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 ALDH4A1P30038 563 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 SLC5A2P31639 672 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 ETV5P41161 510 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 CLCNKAP51800 687 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 WNT3AP56704 352 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 COPS2P61201 443 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 CFHR1Q03591 330 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 XRCC4Q13426 336 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 ALS2CLQ60I27 953 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 CHST15Q7LFX5 561 aaPredicted RBP16.83■□□□□ 0.28
LRRC28-210ENST00000558879 PIM3Q86V86 326 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 GAS2L3Q86XJ1 694 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 TMEM139Q8IV31 216 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 HTR3CQ8WXA8 447 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 GLYATL1Q969I3 302 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 VPS35Q96QK1 796 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 CMKLR1Q99788 373 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 GPR63Q9BZJ6 419 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 CPNE5Q9HCH3 593 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 KLHL8Q9P2G9 620 aaPredicted RBP16.83■□□□□ 0.28
LRRC28-210ENST00000558879 TBC1D29Q9UFV1 150 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 PISDQ9UG56 409 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 ZNHIT2Q9UHR6 403 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 KCNK6Q9Y257 313 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 EFR3BQ9Y2G0 817 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 PRKAB1Q9Y478 270 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 PCDHA3Q9Y5H8 950 aa16.83■□□□□ 0.28
LRRC28-210ENST00000558879 IGHV5-10-1A0A0J9YXX1 117 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 HGSO14964 777 aaPredicted RBP16.82■□□□□ 0.28
LRRC28-210ENST00000558879 NVLO15381 856 aaKnown RBP16.82■□□□□ 0.28
LRRC28-210ENST00000558879 ZW10O43264 779 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 JMJD7P0C870 316 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 THRAP10827 490 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 ACP5P13686 325 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 ZNF8P17098 575 aaPredicted RBP16.82■□□□□ 0.28
LRRC28-210ENST00000558879 CTNNA2P26232 953 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 HMGCLP35914 325 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 LIMK2P53671 638 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 GPLD1P80108 840 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 AMZ1Q400G9 498 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 PHF19Q5T6S3 580 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 ADGRG6Q86SQ4 1221 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 PHYKPLQ8IUZ5 450 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 TTC30BQ8N4P2 665 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 LSM14AQ8ND56 463 aaKnown RBP16.82■□□□□ 0.28
LRRC28-210ENST00000558879 OR4D9Q8NGE8 314 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 GORASP1Q9BQQ3 440 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 B3GNT4Q9C0J1 378 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 LACRTQ9GZZ8 138 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 TRABDQ9H4I3 376 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 TRIM39Q9HCM9 518 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 SARS2Q9NP81 518 aaKnown RBP16.82■□□□□ 0.28
LRRC28-210ENST00000558879 TMPRSS11EQ9UL52 423 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 DUSP10Q9Y6W6 482 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 FASNP49327 2511 aaKnown RBP16.82■□□□□ 0.28
LRRC28-210ENST00000558879 BAHCC1Q9P281 2608 aa16.82■□□□□ 0.28
LRRC28-210ENST00000558879 CCDC66A2RUB6 948 aa16.81■□□□□ 0.28
LRRC28-210ENST00000558879 GRID2O43424 1007 aa16.81■□□□□ 0.28
LRRC28-210ENST00000558879 SLC25A14O95258 325 aaPredicted RBP16.81■□□□□ 0.28
LRRC28-210ENST00000558879 F3P13726 295 aa16.81■□□□□ 0.28
LRRC28-210ENST00000558879 CHRNA4P43681 627 aa16.81■□□□□ 0.28
LRRC28-210ENST00000558879 VAV2P52735 878 aa16.81■□□□□ 0.28
LRRC28-210ENST00000558879 HHEXQ03014 270 aa16.81■□□□□ 0.28
LRRC28-210ENST00000558879 MPP3Q13368 585 aa16.81■□□□□ 0.28
LRRC28-210ENST00000558879 BIRC2Q13490 618 aa16.81■□□□□ 0.28
LRRC28-210ENST00000558879 TRA2AQ13595 282 aaKnown RBP eCLIP16.81■□□□□ 0.28
LRRC28-210ENST00000558879 SLC1A5Q15758 541 aa16.81■□□□□ 0.28
LRRC28-210ENST00000558879 KHDC1Q4VXA5 237 aaKnown RBP16.81■□□□□ 0.28
LRRC28-210ENST00000558879 SIRPB2Q5JXA9 342 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms