RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 CCDC137Q6PK04 289 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 PACS1Q6VY07 963 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ANKS1BQ7Z6G8 1248 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 PHLDB2Q86SQ0 1253 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 DHDDSQ86SQ9 333 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 PATL1Q86TB9 770 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 VPS36Q86VN1 386 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 SLC13A5Q86YT5 568 aaPredicted RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 TICAM1Q8IUC6 712 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 LIX1LQ8IVB5 337 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 SFTPA1Q8IWL2 248 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 MYOCDQ8IZQ8 938 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 SDR16C5Q8N3Y7 309 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 SAMD3Q8N6K7 520 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ALLCQ8N6M5 410 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 SCAIQ8N9R8 606 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 PNLDC1Q8NA58 520 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 ATP11CQ8NB49 1132 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 DEPTORQ8TB45 409 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 FAM172AQ8WUF8 416 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 IPCEF1Q8WWN9 437 aaPredicted RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 RAD54LQ92698 747 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 STMN2Q93045 179 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 LRRC59Q96AG4 307 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 HAUS1Q96CS2 278 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 C18orf8Q96DM3 657 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ABHD8Q96I13 439 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 NSL1Q96IY1 281 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 MPP4Q96JB8 637 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ZNF668Q96K58 619 aaPredicted RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 SNX27Q96L92 541 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 FAM81BQ96LP2 452 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 NLRP4Q96MN2 994 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 MTMR9Q96QG7 549 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 CCT7Q99832 543 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 RIOK1Q9BRS2 568 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 MRPS26Q9BYN8 205 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 OSBPL8Q9BZF1 889 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 PALMDQ9NP74 551 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 PNPLA8Q9NP80 782 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 TRIM36Q9NQ86 728 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 TBC1D23Q9NUY8 699 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ARL8BQ9NVJ2 186 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 RHBDL2Q9NX52 303 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 NDE1Q9NXR1 346 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 NINJ2Q9NZG7 142 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 HERC5Q9UII4 1024 aaKnown RBP3.29□□□□□ -1.88
HERC1-203ENST00000558532 CDH7Q9ULB5 785 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 ASAP1Q9ULH1 1129 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 GRID1Q9ULK0 1009 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 USP22Q9UPT9 525 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 NAALADL1Q9UQQ1 740 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.29□□□□□ -1.88
HERC1-203ENST00000558532 ROBO1Q9Y6N7 1651 aa3.29□□□□□ -1.88
HERC1-203ENST00000558532 DOT1LQ8TEK3 1739 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 KDM3AQ9Y4C1 1321 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 C15orf38-AP3S2A0A0A6YYH1 394 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 CCDC194A0A1B0GVG4 234 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 A0A1W2PPC4 97 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ARHGAP10A1A4S6 786 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 POM121BA6NF01 834 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 TRIM64A6NGJ6 449 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 CLCA1A8K7I4 914 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 RASA4BC9J798 803 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 POC1B-GALNT4F8VUJ3 575 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 H0YJX3 145 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 H3BNX3 289 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 INO80B-WBP1J3KQ70 363 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 PDXKO00764 312 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 PMM2O15305 246 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 TM9SF1O15321 606 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 GYG2O15488 501 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 RASA4O43374 803 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 PRKAB2O43741 272 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 BAIAP3O94812 1187 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 OR6B1O95007 311 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ZCCHC18P0CG32 403 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 APEHP13798 732 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 ETS2P15036 469 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 CHRNB2P17787 502 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 CDH2P19022 906 aaPredicted RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 RBL1P28749 1068 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 MPGP29372 298 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ADSSP30520 456 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SLC5A2P31639 672 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 STIP1P31948 543 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 GNALP38405 381 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 HALP42357 657 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 EPS15P42566 896 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SLCO1A2P46721 670 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ALDH3B2P48448 385 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 DNA2P51530 1060 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 COPAP53621 1224 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 RPS3AP61247 264 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 AP2B1P63010 937 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 NOP14P78316 857 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 SSBP2P81877 361 aaPredicted RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 RELAQ04206 551 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 PTP4A2Q12974 167 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 COASYQ13057 564 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms