RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PNPLA1Q8N8W4 532 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 FAM181AQ8N9Y4 354 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 DTX3LQ8TDB6 740 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 GLMNQ92990 594 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 DNAJC1Q96KC8 554 aaKnown RBP12.24□□□□□ -0.45
SMAD3-205ENST00000558428 GSDMCQ9BYG8 508 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 DDX47Q9H0S4 455 aaKnown RBP12.24□□□□□ -0.45
SMAD3-205ENST00000558428 OR2AG1Q9H205 316 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 UGT1A7Q9HAW7 530 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 UGT1A10Q9HAW8 530 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 UGT1A8Q9HAW9 530 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 TRIM39Q9HCM9 518 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 CASS4Q9NQ75 786 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 EVA1BQ9NVM1 165 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 TRNAU1APQ9NX07 287 aaKnown RBP12.24□□□□□ -0.45
SMAD3-205ENST00000558428 TOR4AQ9NXH8 423 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 ATXN10Q9UBB4 475 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 ZNHIT2Q9UHR6 403 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 APPL1Q9UKG1 709 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 TMPRSS11EQ9UL52 423 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 GPR34Q9UPC5 381 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 NCOR2Q9Y618 2525 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-205ENST00000558428 CCDC78A2IDD5 438 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 DNAJC6O75061 913 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 MTX2O75431 263 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 ECEL1O95672 775 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 ADRB1P08588 477 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 MYF5P13349 255 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 ZNF8P17098 575 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-205ENST00000558428 TPSB2P20231 275 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 AK4P27144 223 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-205ENST00000558428 ACADVLP49748 655 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 DUSP3P51452 185 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-205ENST00000558428 CTBSQ01459 385 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 FOXC1Q12948 553 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 PPP1R7Q15435 360 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 TPSAB1Q15661 275 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 CCDC38Q502W7 563 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 ADGRG6Q86SQ4 1221 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 FAM46DQ8NEK8 389 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 ZNF398Q8TD17 642 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 GPBAR1Q8TDU6 330 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 STYXQ8WUJ0 223 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 TRIM44Q96DX7 344 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-205ENST00000558428 C19orf43Q9BQ61 176 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 BOCQ9BWV1 1114 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 RMI1Q9H9A7 625 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 SIRPGQ9P1W8 387 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 RNF14Q9UBS8 474 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 PRKAB1Q9Y478 270 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 PLEKHM1Q9Y4G2 1056 aa12.23□□□□□ -0.45
SMAD3-205ENST00000558428 PIKFYVEQ9Y2I7 2098 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 LY6G6EA0A0G2JKS1 128 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 TCRBV7S3A2A0A539 114 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 HEATR9A2RTY3 570 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 MROH6A6NGR9 719 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 GPR89AB7ZAQ6 455 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 CCL22O00626 93 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 GRID2O43424 1007 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 VEGFDO43915 354 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 NUAK1O60285 661 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 RFPL3O75679 317 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 SRP72O76094 671 aaKnown RBP12.22□□□□□ -0.45
SMAD3-205ENST00000558428 CDK14O94921 469 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 TRIM16O95361 564 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 GPR89BP0CG08 455 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 CKMT1AP12532 417 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 ACP1P24666 158 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 MC4RP32245 332 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 CA5AP35218 305 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 ACTR1BP42025 376 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 SESN2P58004 480 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-205ENST00000558428 ACTR1AP61163 376 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 XIAPP98170 497 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 CDK16Q00536 496 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 NFATC2Q13469 925 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 PEX6Q13608 980 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 LAMB3Q13751 1172 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 GTF2H3Q13889 308 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 KCNJ11Q14654 390 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 NR0B2Q15466 257 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 KHDC1Q4VXA5 237 aaKnown RBP12.22□□□□□ -0.45
SMAD3-205ENST00000558428 LDLRAP1Q5SW96 308 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 SLC30A9Q6PML9 568 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 CHST15Q7LFX5 561 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-205ENST00000558428 NRROSQ86YC3 692 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 KLHL7Q8IXQ5 586 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 SLC35F3Q8IY50 421 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 ARL10Q8N8L6 244 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 C16orf45Q96MC5 204 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-205ENST00000558428 TTC25Q96NG3 672 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 RANBP9Q96S59 729 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 DPEP2Q9H4A9 486 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 ASB8Q9H765 288 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 NLE1Q9NVX2 485 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-205ENST00000558428 SMOXQ9NWM0 555 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 NCKIPSDQ9NZQ3 722 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 TAAR2Q9P1P5 351 aa12.22□□□□□ -0.45
SMAD3-205ENST00000558428 GULP1Q9UBP9 304 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms