RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 HIVEP3Q5T1R4 2406 aa17.61■□□□□ 0.41
TSPAN3-204ENST00000558394 A0A0U1RQS6 177 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 TCRBV5S1A1TA0A578 114 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 GADD45BO75293 160 aaPredicted RBP17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 RNF8O76064 485 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 SORBS2O94875 1100 aaKnown RBP17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 FGF5P12034 268 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 TNFRSF8P28908 595 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 ZNF135P52742 658 aaPredicted RBP17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 RPS15P62841 145 aaKnown RBP17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 PTSQ03393 145 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 CHRNA6Q15825 494 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 UGT8Q16880 541 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 PGBD5Q8N414 524 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 PHF12Q96QT6 1004 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 AGAP2Q99490 1192 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 SNRNP25Q9BV90 132 aaKnown RBP17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 GPR87Q9BY21 358 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 OSGEPL1Q9H4B0 414 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 ZWILCHQ9H900 591 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 UCK1Q9HA47 277 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 PDE7BQ9NP56 450 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 DNPEPQ9ULA0 475 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 PPIL1Q9Y3C6 166 aa17.6■□□□□ 0.41
TSPAN3-204ENST00000558394 ARGFXA6NJG6 315 aa17.59■□□□□ 0.41
TSPAN3-204ENST00000558394 PRPSAP2O60256 369 aa17.59■□□□□ 0.41
TSPAN3-204ENST00000558394 DPM1O60762 260 aa17.59■□□□□ 0.41
TSPAN3-204ENST00000558394 JAM2P57087 298 aa17.59■□□□□ 0.41
TSPAN3-204ENST00000558394 ITKQ08881 620 aa17.59■□□□□ 0.41
TSPAN3-204ENST00000558394 CHAF1BQ13112 559 aa17.59■□□□□ 0.41
TSPAN3-204ENST00000558394 MARC1Q5VT66 337 aa17.59■□□□□ 0.41
TSPAN3-204ENST00000558394 CACHD1Q5VU97 1274 aa17.59■□□□□ 0.41
TSPAN3-204ENST00000558394 TMEM26Q6ZUK4 368 aa17.59■□□□□ 0.41
TSPAN3-204ENST00000558394 PIH1D2Q8WWB5 315 aa17.59■□□□□ 0.41
TSPAN3-204ENST00000558394 ING2Q9H160 280 aa17.59■□□□□ 0.41
TSPAN3-204ENST00000558394 TAB2Q9NYJ8 693 aa17.59■□□□□ 0.41
TSPAN3-204ENST00000558394 GOLGA6L3A6NEY3 463 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 GRID2O43424 1007 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 CLDN1O95832 211 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 ELAVL4P26378 380 aaKnown RBP17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 EEF1GP26641 437 aaKnown RBP17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 MMP13P45452 471 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 HCAR3P49019 387 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 PDE1BQ01064 536 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 OGDHQ02218 1023 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 TCP11X2Q5H9J9 407 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 FKBP15Q5T1M5 1219 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 CPZQ66K79 652 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 SYVN1Q86TM6 617 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 TICAM1Q8IUC6 712 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 TP53INP2Q8IXH6 220 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 SRRM1Q8IYB3 904 aaKnown RBP17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 ATPAF2Q8N5M1 289 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 ZDHHC12Q96GR4 267 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 PCMTD1Q96MG8 357 aaPredicted RBP17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 PLEKHG4BQ96PX9 1271 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 BRD8Q9H0E9 1235 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 LUZP4Q9P127 313 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 RARRES3Q9UL19 164 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 PCDHGB7Q9Y5F8 929 aa17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 PCYT1BQ9Y5K3 369 aaPredicted RBP17.58■□□□□ 0.4
TSPAN3-204ENST00000558394 CRYBG3Q68DQ2 2970 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 H3BRJ5 948 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 MTA2O94776 668 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 PDHA1P08559 390 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 XRCC1P18887 633 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 PTPN4P29074 926 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 ARL4AP40617 200 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 LEPRP48357 1165 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 KLK7P49862 253 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 STC1P52823 247 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 UBE2IP63279 158 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 JMJD6Q6NYC1 403 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 TMCO3Q6UWJ1 677 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 PRSS42Q7Z5A4 293 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 HPS6Q86YV9 775 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 PSTKQ8IV42 348 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 C5orf34Q96MH7 638 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 AGPAT1Q99943 283 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 MFRPQ9BY79 579 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 CARD9Q9H257 536 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 KLC4Q9NSK0 619 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 PARVAQ9NVD7 372 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 OGFRQ9NZT2 677 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 CWC15Q9P013 229 aaKnown RBP17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 SLC30A1Q9Y6M5 507 aa17.57■□□□□ 0.4
TSPAN3-204ENST00000558394 A0A0J9YYE9 177 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 TRBC1P01850 177 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 CDH6P55285 790 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 RPS18P62269 152 aaKnown RBP17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 DPYSQ14117 519 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 PRR30Q53SZ7 412 aaPredicted RBP17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 PAPD7Q5XG87 772 aaKnown RBP17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 ACAD10Q6JQN1 1059 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 IRGCQ6NXR0 463 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 FAM92BQ6ZTR7 304 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 RHOT1Q8IXI2 618 aa17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 RAVER1Q8IY67 606 aaKnown RBP17.56■□□□□ 0.4
TSPAN3-204ENST00000558394 MCOLN2Q8IZK6 566 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms