RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PDFQ9HBH1 243 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 GDPD2Q9HCC8 539 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 SIX2Q9NPC8 291 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 SIDT1Q9NXL6 827 aaKnown RBP5.13□□□□□ -1.59
SPG11-208ENST00000558155 RCOR3Q9P2K3 495 aaPredicted RBP5.13□□□□□ -1.59
SPG11-208ENST00000558155 CPNE7Q9UBL6 633 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 LNPEPQ9UIQ6 1025 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 NEU3Q9UQ49 428 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 ENTPD4Q9Y227 616 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 C2CD3Q4AC94 2353 aa5.13□□□□□ -1.59
SPG11-208ENST00000558155 MDC1Q14676 2089 aaKnown RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 SSU72P8A0A1W2PR75 194 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 ARHGAP10A1A4S6 786 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 FAM170AA1A519 330 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 HEATR9A2RTY3 570 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 ANKUB1A6NFN9 424 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 LILRA5A6NI73 299 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 SIGLEC16A6NMB1 481 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 EIF3CLB5ME19 914 aaKnown RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 DFFAO00273 331 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 BIN1O00499 593 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 KLHL41O60662 606 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 SOCS5O75159 536 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 CEACAM4O75871 244 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 RASSF9O75901 435 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 UBXN7O94888 489 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 EML2O95834 649 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 CPP00450 1065 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 VIPP01282 170 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 CYP1A1P04798 512 aaPredicted RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 KLK3P07288 261 aaPredicted RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 MMEP08473 750 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 F3P13726 295 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 TYRP1P17643 537 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 XRCC1P18887 633 aaPredicted RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 MMP8P22894 467 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 RFC1P35251 1148 aaPredicted RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 GMPRP36959 345 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 ITGA1P56199 1179 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 PER3P56645 1201 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 TPI1P60174 286 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 NOMO3P69849 1222 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 SH3BP2P78314 561 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 CHAF1BQ13112 559 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 LBRQ14739 615 aaKnown RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 NR6A1Q15406 480 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 TPD52L1Q16890 204 aaPredicted RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 PRR30Q53SZ7 412 aaPredicted RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 RALGPS1Q5JS13 557 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 ARMC12Q5T9G4 340 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 CACHD1Q5VU97 1274 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 WDR59Q6PJI9 974 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 BRICD5Q6PL45 260 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 TMEM26Q6ZUK4 368 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 USP45Q70EL2 814 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 NOP9Q86U38 636 aaKnown RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 TRIM48Q8IWZ4 208 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 IQCKQ8N0W5 287 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 BBS5Q8N3I7 341 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 CISD2Q8N5K1 135 aaKnown RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 ARFGAP1Q8N6T3 406 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 RBMXL3Q8N7X1 1067 aaKnown RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 JOSD2Q8TAC2 188 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 SNRNP40Q96DI7 357 aaKnown RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 C19orf60Q96EN9 201 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 ZNF599Q96NL3 588 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 TGM7Q96PF1 710 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 PSKH2Q96QS6 385 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 NUDCD1Q96RS6 583 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 EIF3CQ99613 913 aaKnown RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 C11orf70Q9BRQ4 267 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 STK33Q9BYT3 514 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 BRD8Q9H0E9 1235 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 LUZP4Q9P127 313 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 VPS18Q9P253 973 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 C5AR2Q9P296 337 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 TBC1D29Q9UFV1 150 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 RWDD2AQ9UIY3 292 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 AJAP1Q9UKB5 411 aaPredicted RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 RARRES3Q9UL19 164 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 FZD10Q9ULW2 581 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 ZDHHC9Q9Y397 364 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 PPIL1Q9Y3C6 166 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 PCDHGC4Q9Y5F7 938 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 ABCA12Q86UK0 2595 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 MN1Q10571 1320 aaPredicted RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 RELNP78509 3460 aa5.12□□□□□ -1.59
SPG11-208ENST00000558155 DIDO1Q9BTC0 2240 aaKnown RBP5.12□□□□□ -1.59
SPG11-208ENST00000558155 A6NL46 340 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 EEF2KO00418 725 aaKnown RBP5.11□□□□□ -1.59
SPG11-208ENST00000558155 ZNF185O15231 689 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 GRID2O43424 1007 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 KRT86O43790 486 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 DNAJC6O75061 913 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 TMEM63AO94886 807 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 PGLSO95336 258 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 CALB1P05937 261 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 ACP5P13686 325 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 ZNF30P17039 623 aa5.11□□□□□ -1.59
SPG11-208ENST00000558155 NELFEP18615 380 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms