RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 HAUS2Q9NVX0 235 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 TTLL3Q9Y4R7 772 aa15.78■□□□□ 0.12
SCFD1-224ENST00000557713 TMEM184BQ9Y519 407 aaPredicted RBP15.78■□□□□ 0.12
SCFD1-224ENST00000557713 ZFC3H1O60293 1989 aaKnown RBP15.77■□□□□ 0.12
SCFD1-224ENST00000557713 KIR2DS5A0A0G2JLQ3 304 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 A0A0G2JNG1 304 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 OR5K4A6NMS3 321 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 KIR2DS3K7RE56 304 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 GRID2O43424 1007 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 NUAK1O60285 661 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 ACP5P13686 325 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 SLC2A4P14672 509 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 ANP32AP39687 249 aaKnown RBP15.77■□□□□ 0.12
SCFD1-224ENST00000557713 PPM1FP49593 454 aaPredicted RBP15.77■□□□□ 0.12
SCFD1-224ENST00000557713 CLCNKAP51800 687 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 GBE1Q04446 702 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 KIR2DS5Q14953 304 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 EID2BQ96D98 161 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 TBC1D10AQ9BXI6 508 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.77■□□□□ 0.12
SCFD1-224ENST00000557713 CARD9Q9H257 536 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 GPN2Q9H9Y4 310 aaPredicted RBP15.77■□□□□ 0.12
SCFD1-224ENST00000557713 PKD2L2Q9NZM6 624 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 ATXN10Q9UBB4 475 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 CPNE7Q9UBL6 633 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 CAPN11Q9UMQ6 739 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 NENFQ9UMX5 172 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 ADGRG1Q9Y653 693 aa15.77■□□□□ 0.12
SCFD1-224ENST00000557713 MAST4O15021 2626 aa15.77■□□□□ 0.11
SCFD1-224ENST00000557713 SNX2O60749 519 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 PROSCO94903 275 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 JCHAINP01591 159 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 MX2P20592 715 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 MAN1A1P33908 653 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 CD86P42081 329 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 TAS2R40P59535 323 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 ZBED6P86452 979 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 ABHD18Q0P651 414 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 NFKBIBQ15653 356 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 COLEC12Q5KU26 742 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 MAP7D3Q8IWC1 876 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 CCDC13Q8IYE1 715 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 UNC5BQ8IZJ1 945 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 CNTD1Q8N815 330 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 CCHCR1Q8TD31 782 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 KIAA1143Q96AT1 154 aaPredicted RBP15.76■□□□□ 0.11
SCFD1-224ENST00000557713 HDAC11Q96DB2 347 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 PLEKHG4BQ96PX9 1271 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 EFHD1Q9BUP0 239 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 TRIT1Q9H3H1 467 aaKnown RBP15.76■□□□□ 0.11
SCFD1-224ENST00000557713 EPB41L1Q9H4G0 881 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 PRDM8Q9NQV8 689 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 DTLQ9NZJ0 730 aa15.76■□□□□ 0.11
SCFD1-224ENST00000557713 LILRA5A6NI73 299 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 POLR1CO15160 346 aaPredicted RBP15.75■□□□□ 0.11
SCFD1-224ENST00000557713 STK17BO94768 372 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 DLGAP3O95886 979 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 ANKRD34CP0C6C1 535 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 ZNF8P17098 575 aaPredicted RBP15.75■□□□□ 0.11
SCFD1-224ENST00000557713 XRCC1P18887 633 aaPredicted RBP15.75■□□□□ 0.11
SCFD1-224ENST00000557713 GJC1P36383 396 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 MAPK9P45984 424 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 UBE2IP63279 158 aaKnown RBP15.75■□□□□ 0.11
SCFD1-224ENST00000557713 SKIDA1Q1XH10 827 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 CCNYQ8ND76 341 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 CPLX3Q8WVH0 158 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 TRIB3Q96RU7 358 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 ADGRE3Q9BY15 652 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 UCK1Q9HA47 277 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 TRIM39Q9HCM9 518 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 SIDT1Q9NXL6 827 aaKnown RBP15.75■□□□□ 0.11
SCFD1-224ENST00000557713 OGFRQ9NZT2 677 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 SCHIP1Q9P0W5 487 aaPredicted RBP15.75■□□□□ 0.11
SCFD1-224ENST00000557713 KLHL3Q9UH77 587 aa15.75■□□□□ 0.11
SCFD1-224ENST00000557713 MN1Q10571 1320 aaPredicted RBP15.74■□□□□ 0.11
SCFD1-224ENST00000557713 KCNK1O00180 336 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 CHUKO15111 745 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 C9P02748 559 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 KRT7P08729 469 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 KDELR1P24390 212 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 OAS2P29728 719 aaKnown RBP15.74■□□□□ 0.11
SCFD1-224ENST00000557713 IFI35P80217 286 aaPredicted RBP15.74■□□□□ 0.11
SCFD1-224ENST00000557713 FANCCQ00597 558 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 SRSF1Q07955 248 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCFD1-224ENST00000557713 PPIDQ08752 370 aaKnown RBP15.74■□□□□ 0.11
SCFD1-224ENST00000557713 CDC20Q12834 499 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 ZBTB17Q13105 803 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 MAP7Q14244 749 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 CRTC2Q53ET0 693 aaPredicted RBP15.74■□□□□ 0.11
SCFD1-224ENST00000557713 ZNF648Q5T619 568 aaPredicted RBP15.74■□□□□ 0.11
SCFD1-224ENST00000557713 ADGRG6Q86SQ4 1221 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 PLXDC1Q8IUK5 500 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 PHYKPLQ8IUZ5 450 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 AVL9Q8NBF6 648 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 GPR26Q8NDV2 337 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 RNF157Q96PX1 679 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 EPN3Q9H201 632 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 OR2AG1Q9H205 316 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 ZFYVE1Q9HBF4 777 aa15.74■□□□□ 0.11
SCFD1-224ENST00000557713 ARFGAP3Q9NP61 516 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms