RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 DCST1Q5T197 706 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 OTUD3Q5T2D3 398 aaPredicted RBP4.79□□□□□ -1.64
GPHN-215ENST00000557654 INTS11Q5TA45 600 aaKnown RBP4.79□□□□□ -1.64
GPHN-215ENST00000557654 TRNP1Q6NT89 227 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 GTF2H2CQ6P1K8 395 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 CYP20A1Q6UW02 462 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 MMS22LQ6ZRQ5 1243 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 KCTD8Q6ZWB6 473 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 SLC26A9Q7LBE3 791 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 GSTA5Q7RTV2 222 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 DIS3L2Q8IYB7 885 aaKnown RBP4.79□□□□□ -1.64
GPHN-215ENST00000557654 ZBTB8BQ8NAP8 495 aaPredicted RBP4.79□□□□□ -1.64
GPHN-215ENST00000557654 SLC24A4Q8NFF2 622 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 DMBX1Q8NFW5 382 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 SMARCE1Q969G3 411 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 ZNF583Q96ND8 569 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 STRA6Q9BX79 667 aa4.79□□□□□ -1.64
GPHN-215ENST00000557654 BRD4O60885 1362 aaPredicted RBP4.78□□□□□ -1.64
GPHN-215ENST00000557654 PRDM2Q13029 1718 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 A0A1W2PS18 150 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 CCDC189A1A4V9 331 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 M0QZ24 198 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 APOBEC1P41238 236 aaKnown RBP4.78□□□□□ -1.64
GPHN-215ENST00000557654 LINC01547P58512 204 aaPredicted RBP4.78□□□□□ -1.64
GPHN-215ENST00000557654 PHEXP78562 749 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 COG7P83436 770 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 DPCR1Q3MIW9 517 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 C18orf63Q68DL7 685 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 OR7E24Q6IFN5 339 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 C19orf48Q6RUI8 117 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 TRMT1LQ7Z2T5 733 aaKnown RBP4.78□□□□□ -1.64
GPHN-215ENST00000557654 CACNA2D4Q7Z3S7 1137 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 TMEM116Q8NCL8 245 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 TAAR8Q969N4 342 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 TMEM68Q96MH6 324 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 QRFPRQ96P65 431 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 SMC6Q96SB8 1091 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 POLR3CQ9BUI4 534 aaPredicted RBP4.78□□□□□ -1.64
GPHN-215ENST00000557654 LTB4R2Q9NPC1 389 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 DLGAP2Q9P1A6 1054 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 PGAP2Q9UHJ9 254 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 FBXL2Q9UKC9 423 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 DLGAP4Q9Y2H0 992 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 FHOD3Q2V2M9 1422 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 ANKRD30BQ9BXX2 1392 aa4.78□□□□□ -1.64
GPHN-215ENST00000557654 SUPT6HQ7KZ85 1726 aaKnown RBP4.77□□□□□ -1.65
GPHN-215ENST00000557654 GRIN2BQ13224 1484 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 MBD5Q9P267 1494 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 CC2D2AQ9P2K1 1620 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 FAM172BPA6NC97 362 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 WDR1O75083 606 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 RTN3O95197 1032 aaPredicted RBP4.77□□□□□ -1.65
GPHN-215ENST00000557654 PITX1P78337 314 aaPredicted RBP4.77□□□□□ -1.65
GPHN-215ENST00000557654 RUNX1T1Q06455 604 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 GRIK2Q13002 908 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 CDC16Q13042 620 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 DMP1Q13316 513 aaPredicted RBP4.77□□□□□ -1.65
GPHN-215ENST00000557654 ZNF234Q14588 700 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 CCNG2Q16589 344 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 DECR1Q16698 335 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 ACCSLQ4AC99 568 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 ALFQ53S48 1182 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 FAM171BQ6P995 826 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 ZNF449Q6P9G9 518 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 ZNF852Q6ZMS4 543 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 GPR180Q86V85 440 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 PCYOX1LQ8NBM8 494 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 HES6Q96HZ4 224 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 HARBI1Q96MB7 349 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 SLC26A6Q9BXS9 759 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 PIGMQ9H3S5 423 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 ZNF334Q9HCZ1 680 aaPredicted RBP4.77□□□□□ -1.65
GPHN-215ENST00000557654 RANGRFQ9HD47 186 aaPredicted RBP4.77□□□□□ -1.65
GPHN-215ENST00000557654 COPG2Q9UBF2 871 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 ACSL5Q9ULC5 683 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 FAF1Q9UNN5 650 aaPredicted RBP4.77□□□□□ -1.65
GPHN-215ENST00000557654 LAS1LQ9Y4W2 734 aaKnown RBP4.77□□□□□ -1.65
GPHN-215ENST00000557654 CLIC4Q9Y696 253 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 MAU2Q9Y6X3 613 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 SAMD9Q5K651 1589 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 ROCK1Q13464 1354 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 MTUS2Q5JR59 1369 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 CUL7Q14999 1698 aa4.77□□□□□ -1.65
GPHN-215ENST00000557654 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 FAM237BA0A1B0GVD1 139 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 A0A1W2PRG0 241 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 PLEKHD1A6NEE1 506 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 H3BQ06 376 aaPredicted RBP4.76□□□□□ -1.65
GPHN-215ENST00000557654 ATP2A1O14983 1001 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 ZNHIT1O43257 154 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 POLR2CP19387 275 aaPredicted RBP4.76□□□□□ -1.65
GPHN-215ENST00000557654 HOXC9P31274 260 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 FASLGP48023 281 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 AMPHP49418 695 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 RPS3AP61247 264 aaKnown RBP4.76□□□□□ -1.65
GPHN-215ENST00000557654 CSTF3Q12996 717 aaKnown RBP4.76□□□□□ -1.65
GPHN-215ENST00000557654 GLIPR1L2Q4G1C9 344 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 TMEM35AQ53FP2 167 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 SIRPB2Q5JXA9 342 aa4.76□□□□□ -1.65
GPHN-215ENST00000557654 TTI2Q6NXR4 508 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms