RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 LRRC49Q8IUZ0 686 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 NDUFAF2Q8N183 169 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 PAF1Q8N7H5 531 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 HTR3CQ8WXA8 447 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 SCRN2Q96FV2 425 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 MCCC1Q96RQ3 725 aaPredicted RBP8.63□□□□□ -1.03
VRK1-206ENST00000557222 NUDCD1Q96RS6 583 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 ZPBPQ9BS86 351 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 SYT11Q9BT88 431 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 ZWILCHQ9H900 591 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 RDH14Q9HBH5 336 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 SEPT11Q9NVA2 429 aaKnown RBP8.63□□□□□ -1.03
VRK1-206ENST00000557222 MOSPD1Q9UJG1 213 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 SUFUQ9UMX1 484 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 SDK2Q58EX2 2172 aa8.63□□□□□ -1.03
VRK1-206ENST00000557222 SPTAN1Q13813 2472 aaKnown RBP8.63□□□□□ -1.03
VRK1-206ENST00000557222 TEX15Q9BXT5 2789 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 NOTCH2Q04721 2471 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 USP9XQ93008 2570 aaPredicted RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 IGHV1OR21-1A0A087WYE8 117 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 TMEM191CA6NGB0 347 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 A6NHS1 94 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 ZNF891A8MT65 544 aaPredicted RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 DFFAO00273 331 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 CPP00450 1065 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 FUCA1P04066 466 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 THRAP10827 490 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 GZMAP12544 262 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 PCSK2P16519 638 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 WT1P19544 449 aaPredicted RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 TNFAIP3P21580 790 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 CES1P23141 567 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 MAP4P27816 1152 aaKnown RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 MAN1A1P33908 653 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 UGT1A3P35503 534 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 PCK1P35558 622 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 ADCY8P40145 1251 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 MAZP56270 477 aaKnown RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 OGDHQ02218 1023 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 UBXN1Q04323 297 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 SRSF1Q07955 248 aaKnown RBP eCLIP8.62□□□□□ -1.03
VRK1-206ENST00000557222 SLC10A7Q0GE19 358 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 DPYSQ14117 519 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 ZNF235Q14590 738 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 CLCA4Q14CN2 919 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 CA9Q16790 459 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 BOLA3Q53S33 107 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 DCAF12Q5T6F0 453 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 XP32Q5T750 250 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 WDR74Q6RFH5 385 aaPredicted RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 ADAMTSL4Q6UY14 1074 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 RBM43Q6ZSC3 357 aaKnown RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 USP45Q70EL2 814 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 ZNF765Q7L2R6 523 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 IRF2BP2Q7Z5L9 587 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 TECPR1Q7Z6L1 1165 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 SFTPA2Q8IWL1 248 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 NAGSQ8N159 534 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 PELI3Q8N2H9 469 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 Q8N3U1 123 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 ARFGAP1Q8N6T3 406 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 ZNF564Q8TBZ8 553 aaPredicted RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 SLC45A3Q96JT2 553 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 CCDC74BQ96LY2 380 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 NSMCE3Q96MG7 304 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 MGME1Q9BQP7 344 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 NUDT22Q9BRQ3 303 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 SNRNP25Q9BV90 132 aaKnown RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 LACRTQ9GZZ8 138 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 TRIT1Q9H3H1 467 aaKnown RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 FANCLQ9NW38 375 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 CWC15Q9P013 229 aaKnown RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 ANAPC2Q9UJX6 822 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 DNPEPQ9ULA0 475 aa8.62□□□□□ -1.03
VRK1-206ENST00000557222 PRRC2CQ9Y520 2896 aaKnown RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 SPTBN1Q01082 2364 aaKnown RBP8.62□□□□□ -1.03
VRK1-206ENST00000557222 H3BRJ5 948 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 PYCARD-AS1I3L0S3 204 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 PPM1DO15297 605 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 MAFKO60675 156 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 PGLSO95336 258 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 PEX11BO96011 259 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 NTRK1P04629 796 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 ZNF30P17039 623 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 AK4P27144 223 aaPredicted RBP8.61□□□□□ -1.03
VRK1-206ENST00000557222 MIPP30301 263 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 ARL4AP40617 200 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 ETV3P41162 512 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 CCR10P46092 362 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 GNPDA1P46926 289 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 CDH6P55285 790 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 MC1RQ01726 317 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 KCNAB2Q13303 367 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 DPYSL2Q16555 572 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 PPP6R3Q5H9R7 873 aaPredicted RBP8.61□□□□□ -1.03
VRK1-206ENST00000557222 COLEC12Q5KU26 742 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 ARMC12Q5T9G4 340 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 RAET1GQ6H3X3 334 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 ALKBH2Q6NS38 261 aa8.61□□□□□ -1.03
VRK1-206ENST00000557222 SLC30A9Q6PML9 568 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms