RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 PEBP4Q96S96 227 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 KLF6Q99612 283 aaPredicted RBP9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 MYOCQ99972 504 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 C1QTNF7Q9BXJ2 289 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 SLC12A9Q9BXP2 914 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 CALN1Q9BXU9 219 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 ZWILCHQ9H900 591 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 FZD3Q9NPG1 666 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 CATSPERZQ9NTU4 200 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 GPATCH2LQ9NWQ4 482 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 MYO1AQ9UBC5 1043 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 LHX3Q9UBR4 397 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 DKK4Q9UBT3 224 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 TPRP12270 2363 aaKnown RBP9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 SPTY2D1-AS1A0A0U1RR47 76 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 POM121BA6NF01 834 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 J3KR12 359 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 RAD51BO15315 384 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 PALMO75781 387 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 PIAS2O75928 621 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 TM7SF2O76062 418 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 CSF2P04141 144 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 TPM3P06753 285 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 ALPPL2P10696 532 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 RHCEP18577 417 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 RAB6AP20340 208 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 XPAP23025 273 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 ACADVLP49748 655 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 PFN3P60673 137 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 YPEL5P62699 121 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 E2F1Q01094 437 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 RHDQ02161 417 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 PTK2BQ14289 1009 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 KRT72Q14CN4 511 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 LAPTM4AQ15012 233 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 ACAP2Q15057 778 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 DPYSL2Q16555 572 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 UGP2Q16851 508 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 TMEM52BQ4KMG9 183 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 TDRD12Q587J7 1177 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 PPP6R3Q5H9R7 873 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 IGF2-ASQ6U949 168 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 CYP4V2Q6ZWL3 525 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 PROSER1Q86XN7 944 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 SLC22A18ASQ8N1D0 253 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 NIPA2Q8N8Q9 360 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 VPS37AQ8NEZ2 397 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 OR4C6Q8NH72 309 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 JADE3Q92613 823 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 CELF6Q96J87 481 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 COX4I2Q96KJ9 171 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 HERPUD2Q9BSE4 406 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 DUSP23Q9BVJ7 150 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 TRIM7Q9C029 511 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 MRPL18Q9H0U6 180 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 SEMA6CQ9H3T2 930 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 CWC15Q9P013 229 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 IPO11Q9UI26 975 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 CSNK1G3Q9Y6M4 447 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 FRYQ5TBA9 3013 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 CHD8Q9HCK8 2581 aa9.88□□□□□ -0.83
HNRNPC-228ENST00000557033 TSPAN11A1L157 253 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 CFAP69A5D8W1 941 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 TRABD2BA6NFA1 517 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 SHISA8B8ZZ34 492 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 H3BM21 787 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 TAF4O00268 1085 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 TRIM38O00635 465 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 SCAMP1O15126 338 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 INSIG1O15503 277 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 SDC3O75056 442 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 GIMD1P0DJR0 217 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 JUPP14923 745 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 HNRNPH3P31942 346 aaKnown RBP9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 HNF1BP35680 557 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 ARL4AP40617 200 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 HALP42357 657 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 RENBPP51606 427 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 POLR2LP62875 67 aaKnown RBP9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 RAC1P63000 192 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 DNAJC3Q13217 504 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 DPYSQ14117 519 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 FZD2Q14332 565 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 NFKBIBQ15653 356 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 ZSCAN23Q3MJ62 389 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 CCDC157Q569K6 752 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 CFAP58Q5T655 872 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 CDPF1Q6NVV7 123 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 BRAT1Q6PJG6 821 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 PTAR1Q7Z6K3 402 aaPredicted RBP9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 SRLQ86TD4 932 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 PARGQ86W56 976 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 ARHGAP12Q8IWW6 846 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 ANKRD42Q8N9B4 389 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 FAM181AQ8N9Y4 354 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 ZNF610Q8N9Z0 462 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 CXorf40AQ8TE69 158 aa9.87□□□□□ -0.83
HNRNPC-228ENST00000557033 TEKT4Q8WW24 435 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms