RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ADGRG6Q86SQ4 1221 aa22.63■■□□□ 1.21
TDP1-216ENST00000556867 TAB3Q8N5C8 712 aaPredicted RBP22.63■■□□□ 1.21
TDP1-216ENST00000556867 CNTNAP3BQ96NU0 1288 aa22.63■■□□□ 1.21
TDP1-216ENST00000556867 CNTNAP3Q9BZ76 1288 aa22.63■■□□□ 1.21
TDP1-216ENST00000556867 DPEP2Q9H4A9 486 aa22.63■■□□□ 1.21
TDP1-216ENST00000556867 ETNK1Q9HBU6 452 aa22.63■■□□□ 1.21
TDP1-216ENST00000556867 SPATS2LQ9NUQ6 558 aaKnown RBP22.63■■□□□ 1.21
TDP1-216ENST00000556867 PAK5Q9P286 719 aa22.63■■□□□ 1.21
TDP1-216ENST00000556867 TTC7AQ9ULT0 858 aaPredicted RBP22.63■■□□□ 1.21
TDP1-216ENST00000556867 PLEKHM1Q9Y4G2 1056 aa22.63■■□□□ 1.21
TDP1-216ENST00000556867 MAP1BP46821 2468 aaKnown RBP22.63■■□□□ 1.21
TDP1-216ENST00000556867 IGF2RP11717 2491 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 FAM149AA5PLN7 773 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 B4DGG1 531 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 ZNF8P17098 575 aaPredicted RBP22.62■■□□□ 1.21
TDP1-216ENST00000556867 ZNF140P52738 457 aaPredicted RBP22.62■■□□□ 1.21
TDP1-216ENST00000556867 CHRNA6Q15825 494 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 C14orf28Q4W4Y0 310 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 SLC30A9Q6PML9 568 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 FAM151BQ6UXP7 276 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 UNQ6494/PRO21346Q6UXR6 183 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 LINC00523Q86TU6 105 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 PRELID2Q8N945 189 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 GLIS1Q8NBF1 620 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 OR4K2Q8NGD2 314 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 OR6C4Q8NGE1 309 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 MAPK15Q8TD08 544 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 OR2AG1Q9H205 316 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 ARFGAP3Q9NP61 516 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 SMOXQ9NWM0 555 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 ZNHIT2Q9UHR6 403 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 KCTD3Q9Y597 815 aa22.62■■□□□ 1.21
TDP1-216ENST00000556867 USP27XA6NNY8 438 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 CHUKO15111 745 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 VEGFDO43915 354 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 SUN1O94901 812 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 ETS1P14921 441 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 JUPP14923 745 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 ACTR1BP42025 376 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 ACTR1AP61163 376 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 SEMA5AQ13591 1074 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 ITGA9Q13797 1035 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 HLTFQ14527 1009 aaKnown RBP eCLIP22.61■■□□□ 1.21
TDP1-216ENST00000556867 PTPRCAPQ14761 206 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 ZNF648Q5T619 568 aaPredicted RBP22.61■■□□□ 1.21
TDP1-216ENST00000556867 CDCP2Q5VXM1 449 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 PRUNE1Q86TP1 453 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 C17orf82Q86X59 251 aaPredicted RBP22.61■■□□□ 1.21
TDP1-216ENST00000556867 MARCH9Q86YJ5 346 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 SFTPA2Q8IWL1 248 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 COL27A1Q8IZC6 1860 aaPredicted RBP22.61■■□□□ 1.21
TDP1-216ENST00000556867 DCBLD1Q8N8Z6 715 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 ZDHHC1Q8WTX9 485 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 RAB6BQ9NRW1 208 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 PRKAB1Q9Y478 270 aa22.61■■□□□ 1.21
TDP1-216ENST00000556867 C1QTNF9BB2RNN3 333 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 GRID2O43424 1007 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 LDB2O43679 373 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 C1QTNF9P0C862 333 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 RPL22P35268 128 aaKnown RBP22.6■■□□□ 1.21
TDP1-216ENST00000556867 CAMK2BQ13554 666 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 KHDC1Q4VXA5 237 aaKnown RBP22.6■■□□□ 1.21
TDP1-216ENST00000556867 CERCAMQ5T4B2 595 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 C4orf22Q6V702 233 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 CCDC74AQ96AQ1 378 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 OSBPL9Q96SU4 736 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 CCDC3Q9BQI4 270 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 ABCG4Q9H172 646 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 FKBPLQ9UIM3 349 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 APPL1Q9UKG1 709 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 PYCARDQ9ULZ3 195 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 CLCA2Q9UQC9 943 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 BPTFQ12830 3046 aa22.6■■□□□ 1.21
TDP1-216ENST00000556867 E7EVH7 732 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 GPR39O43194 453 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 UGT1A9O60656 530 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 MTX2O75431 263 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 PRAMEF1O95521 474 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 MT-CO3P00414 261 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 ZSCAN5DPP0CG00 497 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 GLB1P16278 677 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 UGT1A6P19224 532 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 UGT1A1P22309 533 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 UGT1A4P22310 534 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 UGT1A3P35503 534 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 UGT1A5P35504 534 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 KCNJ1P48048 391 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 CCDC173Q0VFZ6 552 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 LDLRAP1Q5SW96 308 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 CHST15Q7LFX5 561 aaPredicted RBP22.59■■□□□ 1.21
TDP1-216ENST00000556867 DDHD1Q8NEL9 900 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 OR13C4Q8NGS5 318 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 WDR48Q8TAF3 677 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 MS4A14Q96JA4 679 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 NAP1L3Q99457 506 aaPredicted RBP22.59■■□□□ 1.21
TDP1-216ENST00000556867 UGT1A7Q9HAW7 530 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 UGT1A10Q9HAW8 530 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 UGT1A8Q9HAW9 530 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 RABGEF1Q9UJ41 708 aa22.59■■□□□ 1.21
TDP1-216ENST00000556867 SNX12Q9UMY4 172 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms